RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 RAD23AP54725 363 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 OR8G1Q15617 311 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 ZNF770Q6IQ21 691 aaPredicted RBP11.97□□□□□ -0.49
VMP1-206ENST00000587945 PIGWQ7Z7B1 504 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 C1orf87Q8N0U7 546 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 PARP8Q8N3A8 854 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 BOLLQ8N9W6 283 aaKnown RBP11.97□□□□□ -0.49
VMP1-206ENST00000587945 SLC37A3Q8NCC5 494 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 OR2T4Q8NH00 348 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 Q8TCH9 128 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 TAF15Q92804 592 aaKnown RBP eCLIP11.97□□□□□ -0.49
VMP1-206ENST00000587945 SPTSSAQ969W0 71 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 DACT3Q96B18 629 aaPredicted RBP11.97□□□□□ -0.49
VMP1-206ENST00000587945 PLEKHA8Q96JA3 519 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 VNN3Q9NY84 501 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 IL20Q9NYY1 176 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 KCNG2Q9UJ96 466 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 N6AMT1Q9Y5N5 214 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 SPRY1O43609 319 aaPredicted RBP11.96□□□□□ -0.49
VMP1-206ENST00000587945 CCNB2O95067 398 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 SOX14O95416 240 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 GYPBP06028 91 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 SPARCP09486 303 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 CLUP10909 449 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 SLC2A1P11166 492 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 CPT2P23786 658 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 PRKXP51817 358 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 CRMP1Q14194 572 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 GLYATL3Q5SZD4 288 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 WDR25Q64LD2 544 aaPredicted RBP11.96□□□□□ -0.49
VMP1-206ENST00000587945 SFRP4Q6FHJ7 346 aaPredicted RBP11.96□□□□□ -0.49
VMP1-206ENST00000587945 LRRN1Q6UXK5 716 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 RASSF6Q6ZTQ3 369 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 NLRC3Q7RTR2 1065 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 DCXRQ7Z4W1 244 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 CELF2-AS1Q8N7Q2 184 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 ZNF511Q8NB15 262 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 AQP11Q8NBQ7 271 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 OR11L1Q8NGX0 322 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 OR4Q3Q8NH05 313 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 UPRTQ96BW1 309 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 ZMYND19Q96E35 227 aaPredicted RBP11.96□□□□□ -0.49
VMP1-206ENST00000587945 NUDT16L1Q9BRJ7 211 aaKnown RBP11.96□□□□□ -0.49
VMP1-206ENST00000587945 COPS4Q9BT78 406 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 ADAT1Q9BUB4 502 aaKnown RBP11.96□□□□□ -0.49
VMP1-206ENST00000587945 TSSK6Q9BXA6 273 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 TRIM15Q9C019 465 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 CENPMQ9NSP4 180 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 TBC1D23Q9NUY8 699 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 ACTR3BQ9P1U1 418 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 CLN8Q9UBY8 286 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 COMMD3-BMI1R4GMX3 469 aa11.96□□□□□ -0.49
VMP1-206ENST00000587945 TRAV40A0A0B4J280 105 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 KIR2DS1A0A191URI9 304 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 MDFIC2A0A1B0GVS7 189 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 TCRBV5S2A0A599 114 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 GGT3PA6NGU5 568 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 C22orf46C9J442 243 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 FSTL3O95633 263 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 OTX1P32242 354 aaPredicted RBP11.95□□□□□ -0.5
VMP1-206ENST00000587945 MAGEA2P43356 314 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 SPATS1Q496A3 300 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 RPL13AP3Q6NVV1 102 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 ZNF841Q6ZN19 808 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 DCDC5Q6ZRR9 648 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 SPATC1Q76KD6 591 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 LNX2Q8N448 690 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 FITM2Q8N6M3 262 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 ERGIC1Q969X5 290 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 FN3KRPQ9HA64 309 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 ARMC1Q9NVT9 282 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 NDE1Q9NXR1 346 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 U3KQV3 271 aa11.95□□□□□ -0.5
VMP1-206ENST00000587945 B2RBV5 119 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 C3orf80F5H4A9 247 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 ZNF593O00488 134 aaPredicted RBP11.94□□□□□ -0.5
VMP1-206ENST00000587945 DCTN3O75935 186 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 PLATP00750 562 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 PPIAL4GP0DN37 164 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 SPI1P17947 270 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 ENTPD1P49961 510 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 FGF12P61328 243 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 FOXL1Q12952 345 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 TAF13Q15543 124 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 SLC9A3R2Q15599 337 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 DRAM2Q6UX65 266 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 BRD3OSQ6XYD6 125 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 ZNF826PQ6ZT77 177 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 LINC00471Q8N535 108 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 OR56B2PQ8NGI1 322 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 SGMS2Q8NHU3 365 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 SLAMF6Q96DU3 332 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 ZNF747Q9BV97 191 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 MMADHCQ9H3L0 296 aaPredicted RBP11.94□□□□□ -0.5
VMP1-206ENST00000587945 RNF7Q9UBF6 113 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 CTSZQ9UBR2 303 aa11.94□□□□□ -0.5
VMP1-206ENST00000587945 PHYHO14832 338 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 GRPP07492 148 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 RNASE1P07998 156 aaKnown RBP11.93□□□□□ -0.5
VMP1-206ENST00000587945 FMO3P31513 532 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms