RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ANKRD11Q6UB99 2663 aaPredicted RBP17.33■□□□□ 0.37
TRIM47-204ENST00000587339 HLA-HP01893 362 aa17.33■□□□□ 0.36
TRIM47-204ENST00000587339 ABOP16442 354 aa17.33■□□□□ 0.36
TRIM47-204ENST00000587339 RAB11BQ15907 218 aa17.33■□□□□ 0.36
TRIM47-204ENST00000587339 SNAI3Q3KNW1 292 aa17.33■□□□□ 0.36
TRIM47-204ENST00000587339 KRTAP27-1Q3LI81 207 aa17.33■□□□□ 0.36
TRIM47-204ENST00000587339 ACSF3Q4G176 576 aaPredicted RBP17.33■□□□□ 0.36
TRIM47-204ENST00000587339 PYHIN1Q6K0P9 492 aa17.33■□□□□ 0.36
TRIM47-204ENST00000587339 ZNF585AQ6P3V2 769 aa17.33■□□□□ 0.36
TRIM47-204ENST00000587339 FGD2Q7Z6J4 655 aa17.33■□□□□ 0.36
TRIM47-204ENST00000587339 CMTM4Q8IZR5 234 aa17.33■□□□□ 0.36
TRIM47-204ENST00000587339 OR51D1Q8NGF3 324 aa17.33■□□□□ 0.36
TRIM47-204ENST00000587339 SLC25A38Q96DW6 304 aa17.33■□□□□ 0.36
TRIM47-204ENST00000587339 LYZL4Q96KX0 146 aa17.33■□□□□ 0.36
TRIM47-204ENST00000587339 TMEM138Q9NPI0 162 aa17.33■□□□□ 0.36
TRIM47-204ENST00000587339 MAGEB3O15480 346 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 PTTG1O95997 202 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 RAB3AP20336 220 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 BDKRB2P30411 391 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 TMPRSS3P57727 454 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 HGFACQ04756 655 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 GLYATL3Q5SZD4 288 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 PGAP1Q75T13 922 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 JAGN1Q8N5M9 183 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 OR1M1Q8NGA1 313 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 OR13C9Q8NGT0 318 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 OR14K1Q8NGZ2 314 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 SYNPRQ8TBG9 265 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 SETD6Q8TBK2 473 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 GPR137Q96N19 417 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 ATPIF1Q9UII2 106 aa17.32■□□□□ 0.36
TRIM47-204ENST00000587339 DHRS3O75911 302 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 UBL3O95164 117 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 IL18BPO95998 194 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 LCATP04180 440 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 ADRB1P08588 477 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 CD37P11049 281 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 HTR2CP28335 458 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 NR4A2P43354 598 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 ART1P52961 327 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 GUSBP1Q15486 140 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 TRIQKQ629K1 86 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 OR2A2Q6IF42 318 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 FAM166AQ6J272 317 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 C9orf106Q8NAJ2 232 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 CPEB3Q8NE35 698 aaKnown RBP17.31■□□□□ 0.36
TRIM47-204ENST00000587339 RAB40AQ8WXH6 277 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 FAM3DQ96BQ1 224 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 FOXRED1Q96CU9 486 aaPredicted RBP17.31■□□□□ 0.36
TRIM47-204ENST00000587339 ABHD1Q96SE0 405 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 NKX3-1Q99801 234 aaPredicted RBP17.31■□□□□ 0.36
TRIM47-204ENST00000587339 ABCG5Q9H222 651 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 SP140LQ9H930 580 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 CGGBP1Q9UFW8 167 aaPredicted RBP17.31■□□□□ 0.36
TRIM47-204ENST00000587339 TBC1D24Q9ULP9 559 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 MRPS7Q9Y2R9 242 aaKnown RBP17.31■□□□□ 0.36
TRIM47-204ENST00000587339 MTRF1O75570 445 aaKnown RBP17.31■□□□□ 0.36
TRIM47-204ENST00000587339 CD79AP11912 226 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 PITPNAQ00169 270 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 TAB1Q15750 504 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 ZNF529Q6P280 563 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 ANKRD16Q6P6B7 361 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 FAM180AQ6UWF9 173 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 TFAP2EQ6VUC0 442 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 CNEP1R1Q8N9A8 125 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 OR6M1Q8NGM8 313 aa17.31■□□□□ 0.36
TRIM47-204ENST00000587339 S100A16Q96FQ6 103 aaKnown RBP17.31■□□□□ 0.36
TRIM47-204ENST00000587339 LOC390937A0A1W2PQ73 354 aa17.3■□□□□ 0.36
TRIM47-204ENST00000587339 SULT1B1O43704 296 aa17.3■□□□□ 0.36
TRIM47-204ENST00000587339 ERCC1P07992 297 aaPredicted RBP17.3■□□□□ 0.36
TRIM47-204ENST00000587339 ARR3P36575 388 aa17.3■□□□□ 0.36
TRIM47-204ENST00000587339 POU3F4P49335 361 aa17.3■□□□□ 0.36
TRIM47-204ENST00000587339 UCNP55089 124 aa17.3■□□□□ 0.36
TRIM47-204ENST00000587339 RAB1AP62820 205 aa17.3■□□□□ 0.36
TRIM47-204ENST00000587339 SF3B4Q15427 424 aaKnown RBP eCLIP17.3■□□□□ 0.362e-9■■■■■ 35
TRIM47-204ENST00000587339 NSUN5P2Q63ZY6 315 aa17.3■□□□□ 0.36
TRIM47-204ENST00000587339 BAIAP2L2Q6UXY1 529 aa17.3■□□□□ 0.36
TRIM47-204ENST00000587339 C19orf18Q8NEA5 215 aa17.3■□□□□ 0.36
TRIM47-204ENST00000587339 OR1K1Q8NGR3 316 aa17.3■□□□□ 0.36
TRIM47-204ENST00000587339 SGK3Q96BR1 496 aa17.3■□□□□ 0.36
TRIM47-204ENST00000587339 SORCS2Q96PQ0 1159 aa17.3■□□□□ 0.36
TRIM47-204ENST00000587339 RHBDL2Q9NX52 303 aa17.3■□□□□ 0.36
TRIM47-204ENST00000587339 RAXQ9Y2V3 346 aa17.3■□□□□ 0.36
TRIM47-204ENST00000587339 MED12LQ86YW9 2145 aa17.3■□□□□ 0.36
TRIM47-204ENST00000587339 LINC00854A0A1B0GVQ3 168 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 ZNF503-AS2A6NEH8 195 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 C2orf76Q3KRA6 126 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 CCDC54Q8NEL0 328 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 OR52N4Q8NGI2 321 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 HAVCR1Q96D42 359 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 V9GYS6 101 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 ARHGAP21Q5T5U3 1957 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 LOC100289279A0A1B0GTE1 492 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 HLA-DQB1P01920 261 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 ARSBP15848 533 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 HIKESHIQ53FT3 197 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 KRTCAP3Q53RY4 240 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 C1orf100Q5SVJ3 147 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 Q6ZSR3 168 aa17.29■□□□□ 0.36
TRIM47-204ENST00000587339 LYPD6Q86Y78 171 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms