RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 NOL3O60936 208 aaKnown RBP12.93□□□□□ -0.34
NFIX-208ENST00000587260 GATBO75879 557 aaKnown RBP12.93□□□□□ -0.34
NFIX-208ENST00000587260 RGS9O75916 674 aaPredicted RBP12.93□□□□□ -0.34
NFIX-208ENST00000587260 TTRP02766 147 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 CECR9P0C854 216 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 UBCP0CG48 685 aaKnown RBP12.93□□□□□ -0.34
NFIX-208ENST00000587260 APLNRP35414 380 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 C3orf36Q3SXR2 165 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 TMEM244Q5VVB8 128 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 CLEC18BQ6UXF7 455 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 COLCA1Q6ZS62 124 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 NAA40Q86UY6 237 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 ZNF676Q8N7Q3 588 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 CLEC18CQ8NCF0 446 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 SLC30A7Q8NEW0 376 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 OR52H1Q8NGJ2 320 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 RGP1Q92546 391 aaPredicted RBP12.93□□□□□ -0.34
NFIX-208ENST00000587260 PPP1R14AQ96A00 147 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 TRMT61AQ96FX7 289 aaKnown RBP12.93□□□□□ -0.34
NFIX-208ENST00000587260 TXNL4BQ9NX01 149 aaKnown RBP12.93□□□□□ -0.34
NFIX-208ENST00000587260 TRBV5-5A0A0J9YX44 114 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 A0A0U1RQV5 110 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 C5orf49A4QMS7 147 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 GABRPO00591 440 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 SLC22A1O15245 554 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 ICMTO60725 284 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 IGLV1-44P01699 117 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 IGLV3-1P01715 115 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 HGFACQ04756 655 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 ACSM3Q53FZ2 586 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 PAMR1Q6UXH9 720 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 OR8B12Q8NGG6 310 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 GPR148Q8TDV2 347 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 THRSPQ92748 146 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 CENPOQ9BU64 300 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 C1QTNF5Q9BXJ0 243 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 ZNF319Q9P2F9 582 aa12.92□□□□□ -0.34
NFIX-208ENST00000587260 LOC100506127A0A0U1RQW1 187 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 ANXA2P07355 339 aaKnown RBP12.91□□□□□ -0.34
NFIX-208ENST00000587260 SLC2A1P11166 492 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 ACHEP22303 614 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 CCL1P22362 96 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 NR4A1P22736 598 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 SLC6A9P48067 706 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 SPOCK1Q08629 439 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 TBC1D28Q2M2D7 210 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 Q499Y3 187 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 Q6ZSR3 168 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 FAM57BQ71RH2 274 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 RDH10Q8IZV5 341 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 PAQR4Q8N4S7 273 aaPredicted RBP12.91□□□□□ -0.34
NFIX-208ENST00000587260 OR1J2Q8NGS2 313 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 OR51B6Q9H340 312 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 BRD7Q9NPI1 651 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 CRIM1Q9NZV1 1036 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 HHLA2Q9UM44 414 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 GTF2A1LQ9UNN4 478 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 GSTK1Q9Y2Q3 226 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 N6AMT1Q9Y5N5 214 aa12.91□□□□□ -0.34
NFIX-208ENST00000587260 A0A1B0GTI1 187 aa12.9□□□□□ -0.34
NFIX-208ENST00000587260 ZNF879B4DU55 563 aa12.9□□□□□ -0.34
NFIX-208ENST00000587260 J3QW42 95 aa12.9□□□□□ -0.34
NFIX-208ENST00000587260 KIR2DL3P43628 341 aa12.9□□□□□ -0.34
NFIX-208ENST00000587260 NCS1P62166 190 aa12.9□□□□□ -0.34
NFIX-208ENST00000587260 ZMAT1Q5H9K5 638 aa12.9□□□□□ -0.34
NFIX-208ENST00000587260 CEACAM19Q7Z692 300 aa12.9□□□□□ -0.34
NFIX-208ENST00000587260 PLPP7Q8NBV4 271 aa12.9□□□□□ -0.34
NFIX-208ENST00000587260 CCDC54Q8NEL0 328 aa12.9□□□□□ -0.34
NFIX-208ENST00000587260 PGAM5Q96HS1 289 aa12.9□□□□□ -0.34
NFIX-208ENST00000587260 OR10A2Q9H208 303 aa12.9□□□□□ -0.34
NFIX-208ENST00000587260 RGCCQ9H4X1 137 aa12.9□□□□□ -0.34
NFIX-208ENST00000587260 CDH20Q9HBT6 801 aa12.9□□□□□ -0.34
NFIX-208ENST00000587260 EXOSC4Q9NPD3 245 aaKnown RBP12.9□□□□□ -0.34
NFIX-208ENST00000587260 ZNF391Q9UJN7 358 aa12.9□□□□□ -0.34
NFIX-208ENST00000587260 KLF2Q9Y5W3 355 aaPredicted RBP12.9□□□□□ -0.34
NFIX-208ENST00000587260 ATE1O95260 518 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 CLDN1O95832 211 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 RAF1P04049 648 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 UCHL1P09936 223 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 IGFBP2P18065 325 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 ANOS1P23352 680 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 MAPK3P27361 379 aaPredicted RBP12.89□□□□□ -0.35
NFIX-208ENST00000587260 CALCRP30988 508 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 VBP1P61758 197 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 LSM3P62310 102 aaKnown RBP12.89□□□□□ -0.35
NFIX-208ENST00000587260 BSPH1Q075Z2 132 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 INSL4Q14641 139 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 C22orf42Q6IC83 251 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 TMEM108Q6UXF1 575 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 MEX3BQ6ZN04 569 aaKnown RBP12.89□□□□□ -0.35
NFIX-208ENST00000587260 OR13C5Q8NGS8 318 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 OR10AC1Q8NH08 325 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 ITFG2Q969R8 447 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 APOBEC3DQ96AK3 386 aaPredicted RBP12.89□□□□□ -0.35
NFIX-208ENST00000587260 KCTD7Q96MP8 289 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 DACH2Q96NX9 599 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 SLC24A3Q9HC58 644 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 TBCCD1Q9NVR7 557 aa12.89□□□□□ -0.35
NFIX-208ENST00000587260 ANKHD1Q8IWZ3 2542 aaKnown RBP12.88□□□□□ -0.35
NFIX-208ENST00000587260 TRBV5-7A0A0A0MS05 114 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms