RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 F5H5K5 113 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 G3V4G9 280 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 KRT34O76011 436 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 GYPAP02724 150 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 PSKH1P11801 424 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 IFNA8P32881 189 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 MDH1P40925 334 aaKnown RBP9.78□□□□□ -0.84
BRCA1-225ENST00000586385 DLX1P56177 255 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 TRAP1Q12931 704 aaKnown RBP9.78□□□□□ -0.84
BRCA1-225ENST00000586385 SNAI3Q3KNW1 292 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 IFI44LQ53G44 452 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 FBLN7Q53RD9 439 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 KPRPQ5T749 579 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-225ENST00000586385 METTL11BQ5VVY1 283 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 CD276Q5ZPR3 534 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 CGB2Q6NT52 195 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 DPY19L2P2Q6ZN68 376 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 Q6ZPA2 131 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 CBLL1Q75N03 491 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 BTN2A1Q7KYR7 527 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 SLC15A3Q8IY34 581 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 LZICQ8WZA0 190 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 MAP6Q96JE9 813 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 ANKRD19PQ9H560 264 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 MRPL22Q9NWU5 206 aaKnown RBP9.78□□□□□ -0.84
BRCA1-225ENST00000586385 CYB5R1Q9UHQ9 305 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 ENPP4Q9Y6X5 453 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 IGHV3OR15-7A0A075B7D8 119 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 TRBV4-1A0A0J9YWV2 114 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 ZNF816-ZNF321PA0A0X1KG74 233 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 A0A1W2PRQ8 180 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 OOEPA6NGQ2 149 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 DVL1O14640 695 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 TSPAN9O75954 239 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 ZNF682O95780 498 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 LHBP01229 141 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 PRB2P02812 416 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-225ENST00000586385 LCATP04180 440 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 CENPAP49450 140 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 ZNF92Q03936 586 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 SF3A3Q12874 501 aaKnown RBP eCLIP9.77□□□□□ -0.85
BRCA1-225ENST00000586385 DGCR6Q14129 220 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 OR8G1Q15617 311 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 OR8B8Q15620 311 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 PGAP1Q75T13 922 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 VMO1Q7Z5L0 202 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 WDR86Q86TI4 376 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 C11orf53Q8IXP5 236 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 PNLDC1Q8NA58 520 aaKnown RBP9.77□□□□□ -0.85
BRCA1-225ENST00000586385 OR2AE1Q8NHA4 323 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 NMNAT3Q96T66 252 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 PITX2Q99697 317 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 ATF6BQ99941 703 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 SIKE1Q9BRV8 207 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 FN3KRPQ9HA64 309 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 SRA1Q9HD15 236 aaKnown RBP9.77□□□□□ -0.85
BRCA1-225ENST00000586385 C1orf123Q9NWV4 160 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 NDUFAF4Q9P032 175 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 ZNRD1Q9P1U0 126 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 RPUSD1Q9UJJ7 312 aaKnown RBP9.77□□□□□ -0.85
BRCA1-225ENST00000586385 TMEM5Q9Y2B1 443 aa9.77□□□□□ -0.85
BRCA1-225ENST00000586385 MEGF11A6BM72 1044 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-225ENST00000586385 CXCR6O00574 342 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 NME4O00746 187 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 SERPINA1P01009 418 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 HIST1H1CP16403 213 aaKnown RBP9.76□□□□□ -0.85
BRCA1-225ENST00000586385 AMY2BP19961 511 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 CRABP1P29762 137 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 OTX1P32242 354 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-225ENST00000586385 LIPEQ05469 1076 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 EGR3Q06889 387 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 CDONQ4KMG0 1287 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 SAMD5Q5TGI4 173 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 TEX36Q5VZQ5 186 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 PGM2L1Q6PCE3 622 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 ZBTB46Q86UZ6 589 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 Q8N7P7 452 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 SCCPDHQ8NBX0 429 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 LY6G5BQ8NDX9 201 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 SPRYD4Q8WW59 207 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-225ENST00000586385 RCN3Q96D15 328 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 SEH1LQ96EE3 360 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 DHRS1Q96LJ7 313 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 ADAT1Q9BUB4 502 aaKnown RBP9.76□□□□□ -0.85
BRCA1-225ENST00000586385 FN3KQ9H479 309 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 KIF17Q9P2E2 1029 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 KAAG1Q9UBP8 84 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 KPTNQ9Y664 436 aa9.76□□□□□ -0.85
BRCA1-225ENST00000586385 TRAV38-1A0A0B4J264 116 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 OR6C68A6NDL8 312 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 UNC119BA6NIH7 251 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 RNASEK-C17orf49H0YIS7 233 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 M0R135 149 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 NDUFA2O43678 99 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 GMDSO60547 372 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 DIRAS1O95057 198 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 H1F0P07305 194 aaKnown RBP9.75□□□□□ -0.85
BRCA1-225ENST00000586385 RPS27P42677 84 aaKnown RBP9.75□□□□□ -0.85
BRCA1-225ENST00000586385 ECH1Q13011 328 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms