RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PROKR2Q8NFJ6 384 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 OR9Q2Q8NGE9 314 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 OR4C15Q8NGM1 316 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 FAM110DQ8TAY7 271 aaPredicted RBP9.33□□□□□ -0.92
CCDC47-206ENST00000584112 SPTSSAQ969W0 71 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 NSL1Q96IY1 281 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 BTBD10Q9BSF8 475 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 TBC1D23Q9NUY8 699 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 LRCH1Q9Y2L9 728 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 NOP16Q9Y3C1 178 aaKnown RBP9.33□□□□□ -0.92
CCDC47-206ENST00000584112 A0A1B0GWJ7 208 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 B2RBV5 119 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 M0R135 149 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 MLNRO43193 412 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 FSTL3O95633 263 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 IRF2P14316 349 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 ZNF12P17014 697 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 ATP6V1B2P21281 511 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 SLC6A9P48067 706 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 GK2Q14410 553 aaPredicted RBP9.32□□□□□ -0.92
CCDC47-206ENST00000584112 RSPO1Q2MKA7 263 aaPredicted RBP9.32□□□□□ -0.92
CCDC47-206ENST00000584112 FAM98BQ52LJ0 330 aaKnown RBP9.32□□□□□ -0.92
CCDC47-206ENST00000584112 KPRPQ5T749 579 aaPredicted RBP9.32□□□□□ -0.92
CCDC47-206ENST00000584112 RUSC1-AS1Q66K80 236 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 LCN8Q6JVE9 175 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 PGAP1Q75T13 922 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 MRPL21Q7Z2W9 205 aaKnown RBP9.32□□□□□ -0.92
CCDC47-206ENST00000584112 REC114Q7Z4M0 266 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 DHFR2Q86XF0 187 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 CYB561A3Q8NBI2 242 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 AQP11Q8NBQ7 271 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 SPRYD4Q8WW59 207 aaPredicted RBP9.32□□□□□ -0.92
CCDC47-206ENST00000584112 ERGIC1Q969X5 290 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 ZNF799Q96GE5 643 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 MRI1Q9BV20 369 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 SLC22A4Q9H015 551 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 REEP1Q9H902 201 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 WDR76Q9H967 626 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 PNRC2Q9NPJ4 139 aaKnown RBP9.32□□□□□ -0.92
CCDC47-206ENST00000584112 DDX28Q9NUL7 540 aaKnown RBP9.32□□□□□ -0.92
CCDC47-206ENST00000584112 MRPL22Q9NWU5 206 aaKnown RBP9.32□□□□□ -0.92
CCDC47-206ENST00000584112 MIOXQ9UGB7 285 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 OR5V1Q9UGF6 321 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 OPN4Q9UHM6 478 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 BAIAP2Q9UQB8 552 aa9.32□□□□□ -0.92
CCDC47-206ENST00000584112 TCRBV5S2A0A599 114 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 CEACAM18A8MTB9 384 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 F5H5P2 479 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 H0YL77 283 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 CYB5R3P00387 301 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-206ENST00000584112 FSHBP01225 129 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 GASTP01350 101 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 IFNGP01579 166 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 RPS2P15880 293 aaKnown RBP9.31□□□□□ -0.92
CCDC47-206ENST00000584112 CALB2P22676 271 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 FMO3P31513 532 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 PYCR1P32322 319 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 GATA4P43694 442 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 BLVRAP53004 296 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 RAD23AP54725 363 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 ZNF154Q13106 437 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 HNRNPA0Q13151 305 aaKnown RBP9.31□□□□□ -0.92
CCDC47-206ENST00000584112 TRIM25Q14258 630 aaKnown RBP9.31□□□□□ -0.92
CCDC47-206ENST00000584112 GK3PQ14409 553 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 MICAQ29983 383 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 OR2T5Q6IEZ7 315 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 ZNF770Q6IQ21 691 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-206ENST00000584112 MOGAT3Q86VF5 341 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 LNX2Q8N448 690 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 FITM2Q8N6M3 262 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 SLC37A3Q8NCC5 494 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 DEFB108BQ8NET1 73 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 OR2T33Q8NG76 320 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 OR11L1Q8NGX0 322 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 OR2T29Q8NH02 315 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 ZNF420Q8TAQ5 688 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-206ENST00000584112 SLCO4A1Q96BD0 722 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 PLEKHA8Q96JA3 519 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 MAP6Q96JE9 813 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 DDOQ99489 341 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 SSBP3Q9BWW4 388 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-206ENST00000584112 TSSK6Q9BXA6 273 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 DGCR6LQ9BY27 220 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 NTN4Q9HB63 628 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 TMEM165Q9HC07 324 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 MMP26Q9NRE1 261 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 INSIG2Q9Y5U4 225 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 AUP1Q9Y679 476 aa9.31□□□□□ -0.92
CCDC47-206ENST00000584112 RBMY1BA6NDE4 496 aaKnown RBP9.3□□□□□ -0.92
CCDC47-206ENST00000584112 RBMY1EA6NEQ0 496 aaKnown RBP9.3□□□□□ -0.92
CCDC47-206ENST00000584112 TVP23AA6NH52 213 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 TRAPPC2LH3BP13 241 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 FAM107AO95990 144 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 HLA-DPB1P04440 258 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 WNT2P09544 360 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 RBMY1DP0C7P1 496 aaKnown RBP9.3□□□□□ -0.92
CCDC47-206ENST00000584112 ZNF3P17036 446 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 OMGP23515 440 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 OTX1P32242 354 aaPredicted RBP9.3□□□□□ -0.92
CCDC47-206ENST00000584112 CD200P41217 278 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms