RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 SERPINE3A8MV23 424 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 NME2P1O60361 137 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 KRT33AO76009 404 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 IFNGP01579 166 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 GLRA1P23415 457 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 PTH2RP49190 550 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 P2RX1P51575 399 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 LRRC37A5PQ49AS3 106 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 VWA1Q6PCB0 445 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 PRR22Q8IZ63 422 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 SLC25A45Q8N413 288 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ADPRHL1Q8NDY3 354 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 SPSB4Q96A44 273 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 CTHRC1Q96CG8 243 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ARL6Q9H0F7 186 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 PTTG3PQ9NZH4 202 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 PIPOXQ9P0Z9 390 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 A0A0A6YYH2 397 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 A6NJ64 397 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 LMO7DNF2Z398 122 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 IGF2P01344 180 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 VSIG10L2P0DP72 767 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 PPP3CBP16298 524 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 TAS2R43P59537 309 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 RBMS2Q15434 407 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 UBE2NLQ5JXB2 153 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 FAM74A1Q5RGS3 127 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 RBMS3Q6XE24 437 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 SPNS3Q6ZMD2 512 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 SLC35D2Q76EJ3 337 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 OR10H5Q8NGA6 315 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 OR51D1Q8NGF3 324 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 THEM6Q8WUY1 208 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 FAM46BQ96A09 425 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 CSTL1Q9H114 145 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 LPAR2Q9HBW0 351 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 GSKIPQ9P0R6 139 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 DHCR7Q9UBM7 475 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 OR10H1Q9Y4A9 318 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 V9GY05 133 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 PCNX3Q9H6A9 2034 aa10.39□□□□□ -0.75
CDK5RAP3-231ENST00000584063 URB1O60287 2271 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 DLEU1O43261 78 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 TUSC2O75896 110 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 NKX2-2O95096 273 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 F10P00742 488 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 LPLP06858 475 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ZNF35P13682 527 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 TNFRSF1AP19438 455 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 DPP4P27487 766 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 SUMO3P55854 103 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 H2BFSP57053 126 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 HERV-K104P63124 156 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ATXN7L3Q14CW9 347 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 SLC22A10Q63ZE4 541 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 CBLN3Q6UW01 205 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 C3P1Q6ZMU1 363 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 RNF113BQ8IZP6 322 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 RNF152Q8N8N0 203 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 POMGNT2Q8NAT1 580 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 NPEPL1Q8NDH3 523 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 STEAP2Q8NFT2 490 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 STOML3Q8TAV4 291 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ELP5Q8TE02 316 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 SLC39A7Q92504 469 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 WDR76Q9H967 626 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 LYRM4Q9HD34 91 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 GPR27Q9NS67 375 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 CDC14CA4D256 554 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 C11orf98E9PRG8 122 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 GOSR2O14653 212 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 OGG1O15527 345 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 FOXS1O43638 330 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 NDUFB2O95178 105 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 RRASP10301 218 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 TMEM33P57088 247 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 CD226Q15762 336 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 GPR157Q5UAW9 335 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 TFAP2EQ6VUC0 442 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 C17orf107Q6ZR85 190 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 TTLL10Q6ZVT0 673 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 DPY19L4Q7Z388 723 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 TMED4Q7Z7H5 227 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 CLDN23Q96B33 292 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ALG12Q9BV10 488 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 NRSN2Q9GZP1 204 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ABRACLQ9P1F3 81 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 FBXL2Q9UKC9 423 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 TBL2Q9Y4P3 447 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 FREM3P0C091 2139 aa10.38□□□□□ -0.75
CDK5RAP3-231ENST00000584063 VSTM2BA6NLU5 285 aa10.37□□□□□ -0.75
CDK5RAP3-231ENST00000584063 H7C2Y5 167 aa10.37□□□□□ -0.75
CDK5RAP3-231ENST00000584063 OR1D4P47884 311 aa10.37□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ARRB1P49407 418 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP3-231ENST00000584063 RBP2P50120 134 aa10.37□□□□□ -0.75
CDK5RAP3-231ENST00000584063 BLOC1S1P78537 153 aa10.37□□□□□ -0.75
CDK5RAP3-231ENST00000584063 LYSMD4Q5XG99 296 aa10.37□□□□□ -0.75
CDK5RAP3-231ENST00000584063 PWWP2BQ6NUJ5 590 aa10.37□□□□□ -0.75
CDK5RAP3-231ENST00000584063 STAC2Q6ZMT1 411 aa10.37□□□□□ -0.75
CDK5RAP3-231ENST00000584063 GPAT4Q86UL3 456 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms