RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 CASQ2O14958 399 aaPredicted RBP2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 NVLO15381 856 aaKnown RBP2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 HMMRO75330 724 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 TACSTD2P09758 323 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 USF1P22415 310 aaPredicted RBP2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 GALP22466 123 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 PSMB5P28074 263 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 TALDO1P37837 337 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 PNOCQ13519 176 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 DGCR6Q14129 220 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 YIF1BQ5BJH7 314 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 MICU2Q8IYU8 434 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 CSGALNACT2Q8N6G5 542 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 C8orf31Q8N9H6 132 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 SNX31Q8N9S9 440 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 OR13G1Q8NGZ3 307 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 RNF145Q96MT1 663 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 RBBP8Q99708 897 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 FOXC2Q99958 501 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 CHCHD7Q9BUK0 85 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 SLC39A1Q9NY26 324 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 SLC17A7Q9P2U7 560 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 CBY1Q9Y3M2 126 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 SCN4AP35499 1836 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 ADGRL1O94910 1474 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 A0A1B0GW55 424 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 A0A1W2PRD5 423 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 WRBO00258 174 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 ERI3O43414 337 aaKnown RBP2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 PLIN3O60664 434 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 RAD1O60671 282 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 DUX4L2P0CJ85 424 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 DUX4L3P0CJ86 424 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 DUX4L5P0CJ88 424 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 DUX4L6P0CJ89 424 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 DUX4L7P0CJ90 424 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 GSTM3P21266 225 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 SNRNP35Q16560 246 aaKnown RBP2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 RWDD4Q6NW29 188 aaKnown RBP2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 WDR82Q6UXN9 313 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 HORMAD1Q86X24 394 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 ST20-AS1Q8NBB2 130 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 TTLQ8NG68 377 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 OR51E1Q8TCB6 317 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 NEURL3Q96EH8 262 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 GGTLC1Q9BX51 225 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 CLSTN2Q9H4D0 955 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 ELOVL6Q9H5J4 265 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 SLC38A10Q9HBR0 1119 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 CCNB1IP1Q9NPC3 277 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 DUX4Q9UBX2 424 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 RCL1Q9Y2P8 373 aaKnown RBP2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 SIGLEC9Q9Y336 463 aa2.09□□□□□ -2.07
PPP4R1-227ENST00000583988 TICRRQ7Z2Z1 1910 aa2.09□□□□□ -2.08
PPP4R1-227ENST00000583988 A8MUU9 505 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 SLC9A3R1O14745 358 aaPredicted RBP2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 HLA-DQB1P01920 261 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 CSNK2A2P19784 350 aaPredicted RBP2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 RAB5AP20339 215 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 FABP6P51161 128 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 RAD51Q06609 339 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 SIGLEC14Q08ET2 396 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 IGFBP7Q16270 282 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 TEX30Q5JUR7 227 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 GUSBP11Q6P575 273 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 CD300LGQ6UXG3 332 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 COMMD1Q8N668 190 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 SLC35G3Q8N808 338 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 C19orf18Q8NEA5 215 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 BPIFCQ8NFQ6 507 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 CCDC148Q8NFR7 591 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 OR4M1Q8NGD0 313 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 OR56A4Q8NGH8 313 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 RPEQ96AT9 228 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 C9orf72Q96LT7 481 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 PRRC1Q96M27 445 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 ZNF317Q96PQ6 595 aaPredicted RBP2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 TEAD3Q99594 435 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 BPIFA3Q9BQP9 254 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 FRMD8P1Q9BZ68 369 aaPredicted RBP2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 SLIRPQ9GZT3 109 aaKnown RBP2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 PIGUQ9H490 435 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 AGPAT4Q9NRZ5 378 aa2.08□□□□□ -2.08
PPP4R1-227ENST00000583988 C5orf63A6NC05 138 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 OR5H1A6NKK0 313 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 GABRR3A8MPY1 467 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 H7C1H1 209 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 NME4O00746 187 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 PLPP1O14494 284 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 XRCC2O43543 280 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 CTAG2O75638 210 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 CDRT1O95170 752 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 CYB5R3P00387 301 aaPredicted RBP2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 IGLV3-25P01717 112 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 TPM2P07951 284 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 PGA5P0DJD9 388 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 GFAPP14136 432 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 RFC3P40938 356 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 TAS2R39P59534 338 aa2.07□□□□□ -2.08
PPP4R1-227ENST00000583988 TFDP2Q14188 446 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms