RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 PPIDQ08752 370 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 DGCR6Q14129 220 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 HSP90AA4PQ58FG1 418 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 VTCN1Q7Z7D3 282 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 LINC00523Q86TU6 105 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 CMTM8Q8IZV2 173 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 CSGALNACT2Q8N6G5 542 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 LRRC75AQ8NAA5 344 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 OR51F2Q8NH61 342 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 CA5BP1Q8WTZ4 195 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 RAB1CQ92928 201 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 HAUS1Q96CS2 278 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 RCN3Q96D15 328 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 SGTBQ96EQ0 304 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 CERS2Q96G23 380 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 RNF145Q96MT1 663 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 TEAD3Q99594 435 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 TDRD3Q9H7E2 651 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 C8orf33Q9H7E9 229 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 FANCEQ9HB96 536 aa2.24□□□□□ -2.05
SMCHD1-209ENST00000583441 PHLPP2Q6ZVD8 1323 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 CAMTA1Q9Y6Y1 1673 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 H7C1H1 209 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 MPDU1O75352 247 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 TDP2O95551 362 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 HLA-DQA1P01909 254 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 ADRA2AP08913 450 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 PGA4P0DJD7 388 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 PGA3P0DJD8 388 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 PGA5P0DJD9 388 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 AP1S2P56377 157 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 CLDN6P56747 220 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 RPL23P62829 140 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 CRADDP78560 199 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 CDK5Q00535 292 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 ZNF266Q14584 549 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 HADHQ16836 314 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 ZNF829Q3KNS6 432 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 ABCA11PQ4W5N1 156 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 HIKESHIQ53FT3 197 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 LINC00483Q53H64 154 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 MPV17L2Q567V2 206 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 TPRG1LQ5T0D9 272 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 TMEM205Q6UW68 189 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 RTL4Q6ZR62 310 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 SLC16A13Q7RTY0 426 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 ZNF695Q8IW36 515 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 WDFY1Q8IWB7 410 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 C19orf18Q8NEA5 215 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 OR4K5Q8NGD3 323 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 OR10W1Q8NGF6 305 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 OR9A2Q8NGT5 310 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 LILRB4Q8NHJ6 448 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 APH1AQ96BI3 265 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 ZNF317Q96PQ6 595 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 RSG1Q9BU20 258 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 SLIRPQ9GZT3 109 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 OR52D1Q9H346 318 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 ZDHHC4Q9NPG8 344 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 RGS18Q9NS28 235 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 SLC17A7Q9P2U7 560 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 ENOPH1Q9UHY7 261 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 HES2Q9Y543 173 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 RFNGQ9Y644 331 aa2.23□□□□□ -2.05
SMCHD1-209ENST00000583441 NACAE9PAV3 2078 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 ADGRA3Q8IWK6 1321 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 SLC22A20A6NK97 555 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 GOLGA8JA6NMD2 632 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 CENPXA8MT69 81 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 SERPINE3A8MV23 424 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 ZBTB5O15062 677 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 SIVA1O15304 175 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 ZNF207O43670 478 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 SLC16A7O60669 478 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 PAHP00439 452 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 OR8U9P0C7N5 309 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 GOLGA8HP0CJ92 632 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 CD37P11049 281 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 MUC1P15941 1255 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 NPY1RP25929 384 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 BMI1P35226 326 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 PCK1P35558 622 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 OPRK1P41145 380 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 CXCL12P48061 93 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 GFERP55789 205 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 LINC00315P59091 139 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 TAS2R39P59534 338 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 CACNG7P62955 275 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 SLC39A6Q13433 755 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 C5orf64Q2M2E5 130 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 ZNF684Q5T5D7 378 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 TMPRSS11AQ6ZMR5 421 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 LGI3Q8N145 548 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 OR5T3Q8NGG3 340 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 OR6N1Q8NGY5 312 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 PIH1D2Q8WWB5 315 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 L3HYPDHQ96EM0 354 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 ZNF488Q96MN9 340 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 DOK1Q99704 481 aa2.22□□□□□ -2.05
SMCHD1-209ENST00000583441 TBL1YQ9BQ87 522 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms