RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 LINGO2Q7L985 606 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 DTX2Q86UW9 622 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SKA3Q8IX90 412 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 LRRC18Q8N456 261 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 NANOGP1Q8N7R0 232 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 C3orf56Q8N813 242 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 OR1F12Q8NHA8 337 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ST7LQ8TDW4 575 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 RORBQ92753 470 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SLAMF6Q96DU3 332 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SIGLEC11Q96RL6 698 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 KCNJ15Q99712 375 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SH3GL3Q99963 347 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 KCNS3Q9BQ31 491 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ABHD6Q9BV23 337 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ALG8Q9BVK2 526 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 OR2H1Q9GZK4 316 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ACTR6Q9GZN1 396 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ELOVL3Q9HB03 270 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 AMBNQ9NP70 447 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 FAIMQ9NVQ4 179 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 BABAM2Q9NXR7 383 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 B3GNT2Q9NY97 397 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 EIF3KQ9UBQ5 218 aaKnown RBP7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 FBXO9Q9UK97 447 aaPredicted RBP7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 LHFPL6Q9Y693 200 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 KMT2CQ8NEZ4 4911 aaKnown RBP7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 IGKV1D-43A0A0B4J1Z2 117 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 TVP23AA6NH52 213 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 TRIM64CA6NLI5 447 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 DOK2O60496 412 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SELENOFO60613 162 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 LYZL6O75951 148 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CSF3P09919 207 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CD79AP11912 226 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ZNF32P17041 273 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 USF1P22415 310 aaPredicted RBP7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 PTAFRP25105 342 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 STOMP27105 288 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 OTX1P32242 354 aaPredicted RBP7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 OPRL1P41146 370 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 RAD52P43351 418 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 GDI2P50395 445 aaKnown RBP7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 MLLT11Q13015 90 aaPredicted RBP7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 IRF3Q14653 427 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 TIMM50Q3ZCQ8 353 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 UBE2UQ5VVX9 321 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 RPL22L1Q6P5R6 122 aaKnown RBP7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 BCDIN3DQ7Z5W3 292 aaKnown RBP7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SPARTQ8N0X7 666 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 FTMTQ8N4E7 242 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 MS4A15Q8N5U1 240 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 OR4F15Q8NGB8 312 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 S100PBPQ96BU1 408 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 FBXO17Q96EF6 278 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 C1orf159Q96HA4 380 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 COMMD4Q9H0A8 199 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 EMC7Q9NPA0 242 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ACOT13Q9NPJ3 140 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 TBCCD1Q9NVR7 557 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 IKZF2Q9UKS7 526 aa7.54□□□□□ -1.2
PDLIM1P3-201ENST00000582370 A0A0A6YYJ9 748 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 LOC100289279A0A1B0GTE1 492 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 TMEM269A0A1B0GVZ9 245 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 TMEM212A6NML5 194 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 DHRS7CA6NNS2 312 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 XRCC2O43543 280 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SYNGR3O43761 229 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 MTRF1O75570 445 aaKnown RBP7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 MPZL1O95297 269 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SERPINA3P01011 423 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 IGLV1-44P01699 117 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CD8AP01732 235 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CRYAAP02489 173 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ISG15P05161 165 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 MRPL3P09001 348 aaKnown RBP7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 UBCP0CG48 685 aaKnown RBP7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 LIMS3P0CW19 117 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 LIMS4P0CW20 117 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ATP6V1B1P15313 513 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 JUNBP17275 347 aaPredicted RBP7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 C21orf33P30042 268 aaPredicted RBP7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 RPL5P46777 297 aaKnown RBP7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 HTR5AP47898 357 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 PSMA6P60900 246 aaKnown RBP7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 RPS23P62266 143 aaKnown RBP7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ACTG1P63261 375 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 PSG4Q00888 419 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 GALK2Q01415 458 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 EMX1Q04741 257 aaPredicted RBP7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 MALLQ13021 153 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 MED22Q15528 200 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 MEP1BQ16820 701 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 PABPC1L2AQ5JQF8 200 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ZNF684Q5T5D7 378 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SYT6Q5T7P8 510 aaPredicted RBP7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 VASH1Q7L8A9 365 aaPredicted RBP7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 WDFY1Q8IWB7 410 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 YIPF7Q8N8F6 280 aa7.53□□□□□ -1.2
PDLIM1P3-201ENST00000582370 C10orf105Q8TEF2 133 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms