RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 DKK4Q9UBT3 224 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 KLK11Q9UBX7 282 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 N6AMT1Q9Y5N5 214 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 TRAV6A0A075B6T7 132 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 TRAV18A0A075B6X5 111 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 CIB4A0PJX0 185 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 KLRC4-KLRK1H3BQV0 150 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 H7C417 338 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 CST2P09228 141 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 PRSS3P35030 304 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 SLC25A25Q6KCM7 469 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 ZNF529Q6P280 563 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 LYPD6Q86Y78 171 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 TMEM45BQ96B21 275 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 MTFP1Q9UDX5 166 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 RAB22AQ9UL26 194 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 SLC5A6Q9Y289 635 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 CACNA1AO00555 2505 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 C7orf66A4D0T2 115 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 OR5H15A6NDH6 313 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 METTL21EPA6NDL7 271 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 SCGNO76038 276 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 BPNT1O95861 308 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 SP1P08047 785 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 SLC2A1P11166 492 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 CD46P15529 392 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 PLA2G5P39877 138 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 ECH1Q13011 328 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 KCNJ8Q15842 424 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 CCDC92Q53HC0 331 aaPredicted RBP19.92■□□□□ 0.78
CCDC47-204ENST00000582252 TCTE3Q8IZS6 198 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 SCMH1Q96GD3 660 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 PLEK2Q9NYT0 353 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 PLA2G3Q9NZ20 509 aa19.92■□□□□ 0.78
CCDC47-204ENST00000582252 A0A0U1RQV5 110 aa19.91■□□□□ 0.78
CCDC47-204ENST00000582252 LDLRAD4O15165 306 aa19.91■□□□□ 0.78
CCDC47-204ENST00000582252 NME2P1O60361 137 aa19.91■□□□□ 0.78
CCDC47-204ENST00000582252 SYNGR4O95473 234 aa19.91■□□□□ 0.78
CCDC47-204ENST00000582252 NME2P22392 152 aa19.91■□□□□ 0.78
CCDC47-204ENST00000582252 CCR6P51684 374 aa19.91■□□□□ 0.78
CCDC47-204ENST00000582252 SCRN3Q0VDG4 424 aa19.91■□□□□ 0.78
CCDC47-204ENST00000582252 RAB35Q15286 201 aa19.91■□□□□ 0.78
CCDC47-204ENST00000582252 RAB12Q6IQ22 244 aa19.91■□□□□ 0.78
CCDC47-204ENST00000582252 OR13C9Q8NGT0 318 aa19.91■□□□□ 0.78
CCDC47-204ENST00000582252 SLC39A7Q92504 469 aa19.91■□□□□ 0.78
CCDC47-204ENST00000582252 FAM71F1Q96KD3 344 aaPredicted RBP19.91■□□□□ 0.78
CCDC47-204ENST00000582252 CRLF2Q9HC73 371 aa19.91■□□□□ 0.78
CCDC47-204ENST00000582252 TMEM38BQ9NVV0 291 aa19.91■□□□□ 0.78
CCDC47-204ENST00000582252 MRPL15Q9P015 296 aaKnown RBP19.91■□□□□ 0.78
CCDC47-204ENST00000582252 EMC3Q9P0I2 261 aa19.91■□□□□ 0.78
CCDC47-204ENST00000582252 A8MV72 311 aaPredicted RBP19.9■□□□□ 0.78
CCDC47-204ENST00000582252 SLC6A9P48067 706 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 LHX2P50458 406 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 ACTBP60709 375 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 ACTG1P63261 375 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 CD83Q01151 205 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 ZNF775Q96BV0 537 aaPredicted RBP19.9■□□□□ 0.78
CCDC47-204ENST00000582252 HES7Q9BYE0 225 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 MED28Q9H204 178 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 CNTD2Q9H8S5 307 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 SCPEP1Q9HB40 452 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 RANGRFQ9HD47 186 aaPredicted RBP19.9■□□□□ 0.78
CCDC47-204ENST00000582252 A0A0A6YYJ9 748 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 F5H5K5 113 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 EFSO43281 561 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 PRAF2O60831 178 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 PSMB1P20618 241 aaKnown RBP19.9■□□□□ 0.78
CCDC47-204ENST00000582252 STOMP27105 288 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 OTX1P32242 354 aaPredicted RBP19.9■□□□□ 0.78
CCDC47-204ENST00000582252 PCBD1P61457 104 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 BCL2A1Q16548 175 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 HYAL4Q2M3T9 481 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 MDS2Q8NDY4 140 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 OR52N4Q8NGI2 321 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 OR4D6Q8NGJ1 314 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 ZNF486Q96H40 463 aaPredicted RBP19.9■□□□□ 0.78
CCDC47-204ENST00000582252 C20orf85Q9H1P6 137 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 KCNK15Q9H427 330 aa19.9■□□□□ 0.78
CCDC47-204ENST00000582252 IGF2RP11717 2491 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 IGKV3D-15A0A087WSY6 115 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 A6NL46 340 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 FAM166BA8MTA8 275 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 M0R135 149 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 MTRF1O75570 445 aaKnown RBP19.89■□□□□ 0.77
CCDC47-204ENST00000582252 IGLV3-1P01715 115 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 ZNF93P35789 620 aaPredicted RBP19.89■□□□□ 0.77
CCDC47-204ENST00000582252 MAGEA5P43359 124 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 MEOX1P50221 254 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 DEFB109BQ30KR1 87 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 PCGF3Q3KNV8 242 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 ZNF627Q7L945 461 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 TMEM251Q8N6I4 163 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 FAM46BQ96A09 425 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 C10orf35Q96D05 121 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 ZNF799Q96GE5 643 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 ZNF845Q96IR2 970 aaPredicted RBP19.89■□□□□ 0.77
CCDC47-204ENST00000582252 SLCO5A1Q9H2Y9 848 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 MCUBQ9NWR8 336 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 POU2F3Q9UKI9 436 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 MCTS1Q9ULC4 181 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms