RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 LRRC28Q86X40 367 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-220ENST00000581707 CPOQ8IVL8 374 aa16.43■□□□□ 0.22
SREBF1-220ENST00000581707 OR2AE1Q8NHA4 323 aa16.43■□□□□ 0.22
SREBF1-220ENST00000581707 DNAJC9Q8WXX5 260 aa16.43■□□□□ 0.22
SREBF1-220ENST00000581707 PLEKHA8Q96JA3 519 aa16.43■□□□□ 0.22
SREBF1-220ENST00000581707 REPIN1Q9BWE0 567 aaKnown RBP16.43■□□□□ 0.22
SREBF1-220ENST00000581707 TEX12Q9BXU0 123 aa16.43■□□□□ 0.22
SREBF1-220ENST00000581707 MARCH7Q9H992 704 aa16.43■□□□□ 0.22
SREBF1-220ENST00000581707 G6PC2Q9NQR9 355 aa16.43■□□□□ 0.22
SREBF1-220ENST00000581707 KIF17Q9P2E2 1029 aa16.43■□□□□ 0.22
SREBF1-220ENST00000581707 ARHGAP32A7KAX9 2087 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 IGHV3-64DA0A0J9YX35 117 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 C5orf63A6NC05 138 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 CD300LBA8K4G0 201 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 PNPP00491 289 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 SLC2A1P11166 492 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 ANOS1P23352 680 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 MMP16P51512 607 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 BTG1P62324 171 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 TMEM155Q4W5P6 130 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 GLYATL3Q5SZD4 288 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 TMEM236Q5W0B7 351 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 TIGD4Q8IY51 512 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 KLHL36Q8N4N3 616 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 SPICQ8N5J4 248 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 OR5K1Q8NHB7 308 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 ZNF420Q8TAQ5 688 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-220ENST00000581707 TMEM158Q8WZ71 300 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 ZMYND19Q96E35 227 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-220ENST00000581707 ABHD6Q9BV23 337 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 TOR3AQ9H497 397 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 SLC25A19Q9HC21 320 aa16.42■□□□□ 0.22
SREBF1-220ENST00000581707 PAPOLBQ9NRJ5 636 aaKnown RBP16.42■□□□□ 0.22
SREBF1-220ENST00000581707 A0A0G2JMP0 313 aa16.41■□□□□ 0.22
SREBF1-220ENST00000581707 A0A0X1KG70 313 aa16.41■□□□□ 0.22
SREBF1-220ENST00000581707 GGT3PA6NGU5 568 aa16.41■□□□□ 0.22
SREBF1-220ENST00000581707 HSD11B1P28845 292 aa16.41■□□□□ 0.22
SREBF1-220ENST00000581707 DAPP51397 102 aa16.41■□□□□ 0.22
SREBF1-220ENST00000581707 ZMYND11Q15326 602 aa16.41■□□□□ 0.22
SREBF1-220ENST00000581707 KLHL12Q53G59 568 aa16.41■□□□□ 0.22
SREBF1-220ENST00000581707 C1orf146Q5VVC0 180 aa16.41■□□□□ 0.22
SREBF1-220ENST00000581707 FAHD1Q6P587 224 aa16.41■□□□□ 0.22
SREBF1-220ENST00000581707 MOGAT3Q86VF5 341 aa16.41■□□□□ 0.22
SREBF1-220ENST00000581707 CELF2-AS1Q8N7Q2 184 aa16.41■□□□□ 0.22
SREBF1-220ENST00000581707 OR4M2Q8NGB6 313 aa16.41■□□□□ 0.22
SREBF1-220ENST00000581707 RNF133Q8WVZ7 376 aa16.41■□□□□ 0.22
SREBF1-220ENST00000581707 SLC22A4Q9H015 551 aa16.41■□□□□ 0.22
SREBF1-220ENST00000581707 LRRC30A6NM36 301 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 PRODHO43272 600 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 CYB5R3P00387 301 aaPredicted RBP16.4■□□□□ 0.22
SREBF1-220ENST00000581707 APOC1P02654 83 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 CA6P23280 308 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 MDH2P40926 338 aaKnown RBP16.4■□□□□ 0.22
SREBF1-220ENST00000581707 CX3CR1P49238 355 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 CRISP1P54107 249 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 RAD23AP54725 363 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 LCN2P80188 198 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 MAB21L1Q13394 359 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 OR8G1Q15617 311 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 ATP6AP1Q15904 470 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 RHOUQ7L0Q8 258 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 AMELYQ99218 206 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 OPA3Q9H6K4 179 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 SP140LQ9H930 580 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 PATZ1Q9HBE1 687 aaKnown RBP16.4■□□□□ 0.22
SREBF1-220ENST00000581707 TVP23BQ9NYZ1 205 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 METRNQ9UJH8 293 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 NOP16Q9Y3C1 178 aaKnown RBP16.4■□□□□ 0.22
SREBF1-220ENST00000581707 AP4S1Q9Y587 144 aa16.4■□□□□ 0.22
SREBF1-220ENST00000581707 XRCC2O43543 280 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 SELENOFO60613 162 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 FOXH1O75593 365 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 ANXA2P07355 339 aaKnown RBP16.39■□□□□ 0.21
SREBF1-220ENST00000581707 OPRL1P41146 370 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 CD200P41217 278 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 GATA4P43694 442 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 SNAPC1Q16533 368 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 ZNF181Q2M3W8 571 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 SLC35D3Q5M8T2 416 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 DCAF12L2Q5VW00 463 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 MUC20Q8N307 709 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-220ENST00000581707 PARP8Q8N3A8 854 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 ZNF454Q8N9F8 522 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 BBS1Q8NFJ9 593 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 OTOSQ8NHW6 89 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 SPATA3Q8NHX4 192 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 THEM6Q8WUY1 208 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 ERGIC1Q969X5 290 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 METTL17Q9H7H0 456 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-220ENST00000581707 STAB1Q9NY15 2570 aa16.39■□□□□ 0.21
SREBF1-220ENST00000581707 G3V2T6 193 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 J3QLI3 93 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 TBX1O43435 398 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 GMDSO60547 372 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 ZNF205O95201 554 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 AVPP01185 164 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 LYNP07948 512 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 H2BFMP0C1H6 154 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 GATA3P23771 443 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 FASP25445 335 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms