RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 PSMD5Q16401 504 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 LUZP6Q538Z0 58 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 C1orf185Q5T7R7 199 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 MBOAT2Q6ZWT7 520 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 USP50Q70EL3 339 aaPredicted RBP1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 NT5DC3Q86UY8 548 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 CMTM1Q8IZ96 169 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 GTPBP8Q8N3Z3 284 aaPredicted RBP1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 SNX31Q8N9S9 440 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 KCNG3Q8TAE7 436 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 RAB3IL1Q8TBN0 382 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 ZBED3Q96IU2 234 aaPredicted RBP1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 RNF145Q96MT1 663 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 PKMYT1Q99640 499 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 SLIRPQ9GZT3 109 aaKnown RBP1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 TAS2R1Q9NYW7 299 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 ZNF492Q9P255 531 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 FARSAQ9Y285 508 aaKnown RBP1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 R4GN34 69 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 PCDH11XQ9BZA7 1347 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 IGKV1-27A0A075B6S5 117 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 XKRY2A2RUG3 117 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 J3QKU1 62 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 OR7C2O60412 319 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 NMT2O60551 498 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 CLDN11O75508 207 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 GATBO75879 557 aaKnown RBP1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 MT-ND4P03905 459 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 SLC2A3P11169 496 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 CD99P14209 185 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 SLC1A1P43005 524 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 NDUFA8P51970 172 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 ART3Q13508 389 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 PPP1R7Q15435 360 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 CHRNA6Q15825 494 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 TMEM69Q5SWH9 247 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 SLC8B1Q6J4K2 584 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 CMC1Q7Z7K0 106 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 DAZ4Q86SG3 579 aaKnown RBP1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 MDP1Q86V88 176 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 IQCKQ8N0W5 287 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 NECAB1Q8N987 351 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 OR9K2Q8NGE7 335 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 OR6Q1Q8NGQ2 317 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 N4BP2L2Q92802 583 aaPredicted RBP1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 TMEM159Q96B96 161 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 C18orf15Q96N68 181 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 METTL7AQ9H8H3 244 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 DAZ1Q9NQZ3 744 aaKnown RBP1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 TAS2R5Q9NYW4 299 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 IL37Q9NZH6 218 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 CCDC59Q9P031 241 aaKnown RBP1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 TMCC3Q9ULS5 477 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 LRRC42Q9Y546 428 aa1.17□□□□□ -2.22
SMCHD1-206ENST00000581631 TRIP11Q15643 1979 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 SCAMP2O15127 329 aaKnown RBP1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 CLOCKO15516 846 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 OR2J3O76001 311 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 AQP8O94778 261 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 HSPD1P10809 573 aaKnown RBP1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 CSNK2A2P19784 350 aaPredicted RBP1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 PRKACBP22694 351 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 CD70P32970 193 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 BMI1P35226 326 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 TNNT2P45379 298 aaPredicted RBP1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 TAS2R43P59537 309 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 SEMG2Q02383 582 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 DDX39BQ13838 428 aaKnown RBP1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 MRPL23Q16540 153 aaKnown RBP1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 PYDC2Q56P42 97 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 C9orf135Q5VTT2 229 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 REEP3Q6NUK4 255 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 RTL4Q6ZR62 310 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 CBLN2Q8IUK8 224 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 OR1L1Q8NH94 360 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 CAPSLQ8WWF8 208 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 NRBF2Q96F24 287 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 KCNS1Q96KK3 526 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 YARS2Q9Y2Z4 477 aaKnown RBP1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 COMMD3-BMI1R4GMX3 469 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 ATAD2BQ9ULI0 1458 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 NACADO15069 1562 aa1.16□□□□□ -2.22
SMCHD1-206ENST00000581631 C3orf84H3BNL1 204 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 CLDN34H7C241 214 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 TAAR5O14804 337 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 SCELO95171 688 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 CRISP1P54107 249 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 BIKQ13323 160 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 BTN1A1Q13410 526 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 ILKQ13418 452 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 TPTE2P1Q5T6R2 138 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 WDR59Q6PJI9 974 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 SLC16A14Q7RTX9 510 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 FBXO32Q969P5 355 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 HAUS1Q96CS2 278 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 CENPKQ9BS16 269 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 ANKRA2Q9H9E1 313 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 RETNQ9HD89 108 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 RPRD2Q5VT52 1461 aaKnown RBP1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms