RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 IGHV3-11P01762 117 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 ERCC1P07992 297 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 OR1E1P30953 314 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 TALDO1P37837 337 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 NBL1P41271 181 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 FUT5Q11128 374 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 MERTKQ12866 999 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 RBMY1FQ15415 496 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 PGGHGQ32M88 737 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 YIF1BQ5BJH7 314 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 TPTE2P1Q5T6R2 138 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 TTC23LQ6PF05 361 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 BRD3OSQ6XYD6 125 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 SNX31Q8N9S9 440 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 OR52E5Q8NH55 327 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 OR10G6Q8NH81 332 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 FAM81AQ8TBF8 368 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 ZNF707Q96C28 371 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 C8orf44Q96CB5 159 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 ZNF317Q96PQ6 595 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 AUNIPQ9H7T9 357 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 DDX18Q9NVP1 670 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 RHBDL2Q9NX52 303 aa2.22□□□□□ -2.05
SMCHD1-204ENST00000581226 IGKV3D-11A0A0A0MRZ8 115 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 TRAV25A0A0B4J276 109 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 IGHV1-69DA0A0B4J2H0 117 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 TMEM120BA0PK00 339 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 ZNF98A6NK75 572 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 OR5H1A6NKK0 313 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 BTNL10A8MVZ5 291 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 H7C1H1 209 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 CYB5R3P00387 301 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 MYL2P10916 166 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 PRLHRP49683 370 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 RGS8P57771 180 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 CYP24A1Q07973 514 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 ART3Q13508 389 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 NCF4Q15080 339 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 TEX30Q5JUR7 227 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 H3F3CQ6NXT2 135 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 LUZP2Q86TE4 346 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 GABRG1Q8N1C3 465 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 SPANXA2-OT1Q8N9U9 137 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 APCDD1LQ8NCL9 501 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 GPR26Q8NDV2 337 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 AGR3Q8TD06 166 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 CDX2Q99626 313 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 SAMD10Q9BYL1 202 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 FRMD8P1Q9BZ68 369 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 LYRM4Q9HD34 91 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 MRPS30Q9NP92 439 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 ACP6Q9NPH0 428 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 AHSPQ9NZD4 102 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 PDP1Q9P0J1 537 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 C2orf16Q68DN1 1984 aa2.21□□□□□ -2.06
SMCHD1-204ENST00000581226 ADGRL1O94910 1474 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 KCNE1BA0A087WTH5 132 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 IGHV3-49A0A0A0MS15 119 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 IGHV3-72A0A0B4J1Y9 119 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 KBTBD11-OT1A0A1B0GTJ5 212 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 GOLGA6L7A0A1B0GV03 622 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 PDZK1P1A8MUH7 402 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 ZBTB5O15062 677 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 CHMP2AO43633 222 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 HUS1O60921 280 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 GSTM3P21266 225 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 GTF2E2P29084 291 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 UQCRFS1P47985 274 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 FAM222AQ5U5X8 452 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 SPINT4Q6UDR6 99 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 KATNAL2Q8IYT4 538 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 BPIFCQ8NFQ6 507 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 OR1J4Q8NGS1 313 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 OR1P1Q8NH06 330 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 OR5K2Q8NHB8 316 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 NRBF2Q96F24 287 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 RNF145Q96MT1 663 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 MTG1Q9BT17 334 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 ACTR3CQ9C0K3 210 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 ELOVL6Q9H5J4 265 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 BEX1Q9HBH7 125 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 LYARQ9NX58 379 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 SLC17A7Q9P2U7 560 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 CLN8Q9UBY8 286 aa2.2□□□□□ -2.06
SMCHD1-204ENST00000581226 FHOD3Q2V2M9 1422 aa2.19□□□□□ -2.06
SMCHD1-204ENST00000581226 IGHV3OR16-8A0A075B7F1 116 aa2.19□□□□□ -2.06
SMCHD1-204ENST00000581226 H7C0C1 242 aa2.19□□□□□ -2.06
SMCHD1-204ENST00000581226 WRBO00258 174 aa2.19□□□□□ -2.06
SMCHD1-204ENST00000581226 SLC9A3R1O14745 358 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-204ENST00000581226 LSM8O95777 96 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-204ENST00000581226 CSNK2A2P19784 350 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-204ENST00000581226 PSMB5P28074 263 aa2.19□□□□□ -2.06
SMCHD1-204ENST00000581226 CD34P28906 385 aa2.19□□□□□ -2.06
SMCHD1-204ENST00000581226 MRPL19P49406 292 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-204ENST00000581226 GDI2P50395 445 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-204ENST00000581226 TAS2R46P59540 309 aa2.19□□□□□ -2.06
SMCHD1-204ENST00000581226 UBE2MP61081 183 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-204ENST00000581226 PPIDQ08752 370 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-204ENST00000581226 SIGLEC14Q08ET2 396 aa2.19□□□□□ -2.06
SMCHD1-204ENST00000581226 IL15RAQ13261 267 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms