RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 HSPB11Q9Y547 144 aa9.15□□□□□ -0.94
MSI2-209ENST00000579483 LTBP1Q14766 1721 aa9.15□□□□□ -0.94
MSI2-209ENST00000579483 IGHV1-45A0A0A0MS14 117 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 A0A1B0GTH9 108 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 TEX51A0A1B0GUA7 166 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 hADV38S2A0JD32 116 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 ZNF354AO60765 605 aaPredicted RBP9.15□□□□□ -0.95
MSI2-209ENST00000579483 ATF1P18846 271 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 PHC1P78364 1004 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 PABPC1L2AQ5JQF8 200 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 FJX1Q86VR8 437 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 CATSPERDQ86XM0 798 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 CDC20BQ86Y33 519 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 PLPP7Q8NBV4 271 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 OR6S1Q8NH40 331 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 NMNAT2Q9BZQ4 307 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 ACOXLQ9NUZ1 547 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 FOXS1O43638 330 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 NGFRP08138 427 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 CCL3P10147 92 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 TBPP20226 339 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 BRS3P32247 399 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 ZNF616Q08AN1 781 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 PLA1AQ53H76 456 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 FAM209AQ5JX71 171 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 PRAMEF5Q5TYX0 476 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 ZNF468Q5VIY5 522 aaPredicted RBP9.15□□□□□ -0.95
MSI2-209ENST00000579483 PRAMEF6Q5VXH4 476 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 C19orf48Q6RUI8 117 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 OR51D1Q8NGF3 324 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 CD300LFQ8TDQ1 290 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 PTPMT1Q8WUK0 201 aaPredicted RBP9.15□□□□□ -0.95
MSI2-209ENST00000579483 RDH5Q92781 318 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 SLC25A21Q9BQT8 299 aaPredicted RBP9.15□□□□□ -0.95
MSI2-209ENST00000579483 CPNE5Q9HCH3 593 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 TMEM74BQ9NUR3 256 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 ONECUT1Q9UBC0 465 aa9.15□□□□□ -0.95
MSI2-209ENST00000579483 ZNF638Q14966 1978 aaKnown RBP9.14□□□□□ -0.95
MSI2-209ENST00000579483 A0A1W2PPV9 198 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 ARPC1BO15143 372 aaKnown RBP9.14□□□□□ -0.95
MSI2-209ENST00000579483 CD79BP40259 229 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 RPS16P62249 146 aaKnown RBP9.14□□□□□ -0.95
MSI2-209ENST00000579483 RPS25P62851 125 aaKnown RBP9.14□□□□□ -0.95
MSI2-209ENST00000579483 KIAA0040Q15053 153 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 C17orf78Q8N4C9 275 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 SPICQ8N5J4 248 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 SLC38A9Q8NBW4 561 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 CCL17Q92583 94 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 PTP4A1Q93096 173 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 PELI1Q96FA3 418 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 MED30Q96HR3 178 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 SLC35E1Q96K37 410 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 COMMD5Q9GZQ3 224 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 ACKR4Q9NPB9 350 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 TAS2R4Q9NYW5 299 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 MEIS3P1A6NDR6 274 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 HPGDSO60760 199 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 SLC2A10O95528 541 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 IFI6P09912 130 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 SHC1P29353 583 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 ACSM1Q08AH1 577 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 FBXW9Q5XUX1 488 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 ACSM5Q6NUN0 579 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 ARHGEF39Q8N4T4 335 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 SCARF2Q96GP6 870 aaPredicted RBP9.14□□□□□ -0.95
MSI2-209ENST00000579483 PSD2Q9BQI7 771 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 PLCXD1Q9NUJ7 323 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 CABIN1Q9Y6J0 2220 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 TMEM82A0PJX8 343 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 SHISA8B8ZZ34 492 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 ZNF32P17041 273 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 TUBG1P23258 451 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 ERHP84090 104 aaKnown RBP9.14□□□□□ -0.95
MSI2-209ENST00000579483 SMN1Q16637 294 aaKnown RBP9.14□□□□□ -0.95
MSI2-209ENST00000579483 TBRG1Q3YBR2 411 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 CCBE1Q6UXH8 406 aaPredicted RBP9.14□□□□□ -0.95
MSI2-209ENST00000579483 SMIM15Q7Z3B0 74 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 OSR2Q8N2R0 312 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 NANOGP1Q8N7R0 232 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 OR6K3Q8NGY3 331 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 OTOSQ8NHW6 89 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 MCHR2Q969V1 340 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 GNB4Q9HAV0 340 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 BARX1Q9HBU1 254 aaPredicted RBP9.14□□□□□ -0.95
MSI2-209ENST00000579483 TUBG2Q9NRH3 451 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 HLA-AP01891 365 aaKnown RBP9.14□□□□□ -0.95
MSI2-209ENST00000579483 HOXB1P14653 301 aaPredicted RBP9.14□□□□□ -0.95
MSI2-209ENST00000579483 ALDH3B1P43353 468 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 LSM6P62312 80 aaKnown RBP9.14□□□□□ -0.95
MSI2-209ENST00000579483 VMA21Q3ZAQ7 101 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 WNT2BQ93097 391 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 CITED4Q96RK1 184 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 EIF5A2Q9GZV4 153 aaKnown RBP9.14□□□□□ -0.95
MSI2-209ENST00000579483 FAM234AQ9H0X4 552 aa9.14□□□□□ -0.95
MSI2-209ENST00000579483 LIN7CQ9NUP9 197 aaKnown RBP9.14□□□□□ -0.95
MSI2-209ENST00000579483 TXNL4BQ9NX01 149 aaKnown RBP9.14□□□□□ -0.95
MSI2-209ENST00000579483 NPIPB8E9PQR5 432 aa9.13□□□□□ -0.95
MSI2-209ENST00000579483 K7EQM0 130 aa9.13□□□□□ -0.95
MSI2-209ENST00000579483 IFNL4K9M1U5 179 aa9.13□□□□□ -0.95
MSI2-209ENST00000579483 SNRPBP14678 240 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms