RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 CX3CR1P49238 355 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 HCCSP53701 268 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 PRSS12P56730 875 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 ACTR3P61158 418 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 KRTAP1-1Q07627 177 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 OR8G1Q15617 311 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 SLC35D3Q5M8T2 416 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 ZFP1Q6P2D0 407 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 FAHD2BQ6P2I3 314 aaPredicted RBP5.56□□□□□ -1.52
TRAF4-213ENST00000578917 COLCA1Q6ZS62 124 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 GLCCI1Q86VQ1 547 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 COMMD2Q86X83 199 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 PARP8Q8N3A8 854 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 KLHL36Q8N4N3 616 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 TCEANCQ8N8B7 351 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 BBS1Q8NFJ9 593 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 OR52H1Q8NGJ2 320 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 OR10S1Q8NGN2 331 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 OR11L1Q8NGX0 322 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 OR2AE1Q8NHA4 323 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 CLDND2Q8NHS1 167 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 ST7LQ8TDW4 575 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 ITLN1Q8WWA0 313 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 STMN2Q93045 179 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 RAB39BQ96DA2 213 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 DUS3LQ96G46 650 aaKnown RBP5.56□□□□□ -1.52
TRAF4-213ENST00000578917 FAHD2AQ96GK7 314 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 PGAM5Q96HS1 289 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 TEAD3Q99594 435 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 CIB1Q99828 191 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 RBM4BQ9BQ04 359 aaKnown RBP5.56□□□□□ -1.52
TRAF4-213ENST00000578917 OSBPL10Q9BXB5 764 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 SLC22A4Q9H015 551 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 OR10A2Q9H208 303 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 TOR3AQ9H497 397 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 ZNF665Q9H7R5 613 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 SLC25A19Q9HC21 320 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 PNRC2Q9NPJ4 139 aaKnown RBP5.56□□□□□ -1.52
TRAF4-213ENST00000578917 DDX28Q9NUL7 540 aaKnown RBP5.56□□□□□ -1.52
TRAF4-213ENST00000578917 TMEM106BQ9NUM4 274 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 IMPAD1Q9NX62 359 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 LPAR3Q9UBY5 353 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 TMEFF2Q9UIK5 374 aaPredicted RBP5.56□□□□□ -1.52
TRAF4-213ENST00000578917 OAZ3Q9UMX2 235 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 WIPI2Q9Y4P8 454 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 TMEM14AQ9Y6G1 99 aa5.56□□□□□ -1.52
TRAF4-213ENST00000578917 VPS13CQ709C8 3753 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 A0A096LNT2 108 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 IQCF6A8MYZ5 107 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 F5H5P2 479 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 H0YL77 283 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 WNT9BO14905 357 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 PRKYO43930 277 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 GMDSO60547 372 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 RP2O75695 350 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 GRPP07492 148 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 MSMBP08118 114 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 CD55P08174 381 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 SRD5A1P18405 259 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 EPHA2P29317 976 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 DDOSTP39656 456 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 ZNF121P58317 390 aaPredicted RBP5.55□□□□□ -1.52
TRAF4-213ENST00000578917 CDC42P60953 191 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 ZNF92Q03936 586 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 MZT1Q08AG7 82 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 PCK2Q16822 640 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 SNAI3Q3KNW1 292 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 TMEM255AQ5JRV8 349 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 GLYATL3Q5SZD4 288 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 FAM120AOSQ5T036 256 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 LINC01590Q5TEZ4 76 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 KDM4DQ6B0I6 523 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 LRRN1Q6UXK5 716 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 Q6ZR03 302 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 RHOUQ7L0Q8 258 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 MEPCEQ7L2J0 689 aaKnown RBP5.55□□□□□ -1.52
TRAF4-213ENST00000578917 SLC16A9Q7RTY1 509 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 MOGAT3Q86VF5 341 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 TIGD4Q8IY51 512 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 C1orf87Q8N0U7 546 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 FTMTQ8N4E7 242 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 BOLLQ8N9W6 283 aaKnown RBP5.55□□□□□ -1.52
TRAF4-213ENST00000578917 SPERTQ8NA61 448 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 OR8S1Q8NH09 359 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 OR51F2Q8NH61 342 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 OTOSQ8NHW6 89 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 FAM81AQ8TBF8 368 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 TMEM163Q8TC26 289 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 RNF133Q8WVZ7 376 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 ASB17Q8WXJ9 295 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 RFKQ969G6 155 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 REEP6Q96HR9 211 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 HIST1H2AAQ96QV6 131 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 CNN2Q99439 309 aaKnown RBP5.55□□□□□ -1.52
TRAF4-213ENST00000578917 PKP2Q99959 881 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 SLC30A2Q9BRI3 323 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 REPIN1Q9BWE0 567 aaKnown RBP5.55□□□□□ -1.52
TRAF4-213ENST00000578917 MROQ9BYG7 248 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 YIPF3Q9GZM5 350 aa5.55□□□□□ -1.52
TRAF4-213ENST00000578917 OPA3Q9H6K4 179 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms