RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 PPP1R14AQ96A00 147 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 OR2J1Q9GZK6 312 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 UBTD1Q9HAC8 227 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 G6PC2Q9NQR9 355 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 CA10Q9NS85 328 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 BABAM2Q9NXR7 383 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 ZNF319Q9P2F9 582 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 NUFIP1Q9UHK0 495 aaKnown RBP10.45□□□□□ -0.74
IFT20-207ENST00000578547 LSM2Q9Y333 95 aaKnown RBP10.45□□□□□ -0.74
IFT20-207ENST00000578547 A0A087WXM4 84 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 A0A1W2PPR1 153 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 TRIM64A6NGJ6 449 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 E7EQL1 145 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 H3BSH0 61 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 ICMTO60725 284 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 GOSR1O95249 250 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 TTRP02766 147 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 PRF1P14222 555 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 MPV17P39210 176 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 KIR3DL2P43630 455 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 FABP6P51161 128 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 EMX1Q04741 257 aaPredicted RBP10.44□□□□□ -0.74
IFT20-207ENST00000578547 MRPL28Q13084 256 aaKnown RBP10.44□□□□□ -0.74
IFT20-207ENST00000578547 NEDD8Q15843 81 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 COLCA1Q6ZS62 124 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 MRPL21Q7Z2W9 205 aaKnown RBP10.44□□□□□ -0.74
IFT20-207ENST00000578547 PRSS35Q8N3Z0 413 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 ZNF485Q8NCK3 441 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 OR2G2Q8NGZ5 317 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 LILRB1Q8NHL6 650 aaPredicted RBP10.44□□□□□ -0.74
IFT20-207ENST00000578547 OR51E1Q8TCB6 317 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 RNF166Q96A37 237 aaPredicted RBP10.44□□□□□ -0.74
IFT20-207ENST00000578547 C14orf79Q96F83 325 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 REEP6Q96HR9 211 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 COG8Q96MW5 612 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 SYT3Q9BQG1 590 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 CLEC4MQ9H2X3 399 aaPredicted RBP10.44□□□□□ -0.74
IFT20-207ENST00000578547 ACOT13Q9NPJ3 140 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 CISD1Q9NZ45 108 aaKnown RBP10.44□□□□□ -0.74
IFT20-207ENST00000578547 FRRS1LQ9P0K9 344 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 FLNBO75369 2602 aaKnown RBP10.44□□□□□ -0.74
IFT20-207ENST00000578547 ROS1P08922 2347 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 CRYBG3Q68DQ2 2970 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 DCHS2Q6V1P9 2916 aa10.44□□□□□ -0.74
IFT20-207ENST00000578547 CELSR2Q9HCU4 2923 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 TRBV2A0A0J9YWF9 115 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 ACOD1A6NK06 481 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 J3QW42 95 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 P2RY10O00398 339 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 XRCC2O43543 280 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 OR4A8P0C604 315 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 PSMB9P28065 219 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 GCH1P30793 250 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 GLRXP35754 106 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 TGM4P49221 684 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 TAS2R43P59537 309 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 ZNF92Q03936 586 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 SLC3A1Q07837 685 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 ALKBH1Q13686 389 aaKnown RBP10.43□□□□□ -0.74
IFT20-207ENST00000578547 GK2Q14410 553 aaPredicted RBP10.43□□□□□ -0.74
IFT20-207ENST00000578547 CDK5R1Q15078 307 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 MSMPQ1L6U9 139 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 ZNF718Q3SXZ3 478 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 KCTD8Q6ZWB6 473 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 ZNF367Q7RTV3 350 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 ELMOD2Q8IZ81 293 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 ZNF676Q8N7Q3 588 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 SYNPRQ8TBG9 265 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 KLF14Q8TD94 323 aaPredicted RBP10.43□□□□□ -0.74
IFT20-207ENST00000578547 HAVCR2Q8TDQ0 301 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 TMEM171Q8WVE6 324 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 FBXW5Q969U6 566 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 MARS2Q96GW9 593 aaKnown RBP10.43□□□□□ -0.74
IFT20-207ENST00000578547 FAM71F1Q96KD3 344 aaPredicted RBP10.43□□□□□ -0.74
IFT20-207ENST00000578547 GPR84Q9NQS5 396 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 DUSP13Q9UII6 198 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 ST6GALNAC2Q9UJ37 374 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 CMAHPQ9Y471 501 aa10.43□□□□□ -0.74
IFT20-207ENST00000578547 SIRT4Q9Y6E7 314 aaPredicted RBP10.43□□□□□ -0.74
IFT20-207ENST00000578547 HEATR1Q9H583 2144 aaKnown RBP10.43□□□□□ -0.74
IFT20-207ENST00000578547 UNC79Q9P2D8 2635 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 A0A1B0GVI7 797 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 LOC107986453A0A1B0GWG9 222 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 A0A1W2PPW3 197 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 HS3ST1O14792 307 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 CLPTM1O96005 669 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 UBCP0CG48 685 aaKnown RBP10.42□□□□□ -0.74
IFT20-207ENST00000578547 PCMT1P22061 227 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 SSTR2P30874 369 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 KLF3P57682 345 aaPredicted RBP10.42□□□□□ -0.74
IFT20-207ENST00000578547 ADIPOQQ15848 244 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 CCDC58Q4VC31 144 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 FDX2Q6P4F2 183 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 RPL22L1Q6P5R6 122 aaKnown RBP10.42□□□□□ -0.74
IFT20-207ENST00000578547 PGAP1Q75T13 922 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 LRP11Q86VZ4 500 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 EGFL6Q8IUX8 553 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 RDH10Q8IZV5 341 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 BHLHE23Q8NDY6 225 aa10.42□□□□□ -0.74
IFT20-207ENST00000578547 OR5AK2Q8NH90 309 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms