RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 Q6ZRG5 221 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 NAXDQ8IW45 347 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 CPNE4Q96A23 557 aaPredicted RBP10.83□□□□□ -0.68
ERBB2-206ENST00000578373 TSPAN32Q96QS1 320 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 PIGMQ9H3S5 423 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 C12orf49Q9H741 205 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 LHX9Q9NQ69 397 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 TMEM184BQ9Y519 407 aaPredicted RBP10.83□□□□□ -0.68
ERBB2-206ENST00000578373 LOC102725191A0A1B0GVB3 256 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 ZFP92A6NM28 416 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 H3BP45 60 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 ARPC3O15145 178 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 IL2RGP31785 369 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 FCGR2CP31995 323 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 LGALSLQ3ZCW2 172 aaPredicted RBP10.83□□□□□ -0.68
ERBB2-206ENST00000578373 TMEM68Q96MH6 324 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 ZCCHC4Q9H5U6 513 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 MTFP1Q9UDX5 166 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 ACACAQ13085 2346 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 FAM166BA8MTA8 275 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 MCRIP1C9JLW8 97 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 NPIPB8E9PQR5 432 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 M0R135 149 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 HSD17B6O14756 317 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 LILRB5O75023 590 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 PPP1R1AQ13522 171 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 OR5AS1Q8N127 324 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 SLC43A2Q8N370 569 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 PRSS35Q8N3Z0 413 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 C9orf62Q8N4C0 152 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 PLPP5Q8NEB5 264 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 SLC30A7Q8NEW0 376 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 ABHD5Q8WTS1 349 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 ZNF799Q96GE5 643 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 OCSTAMPQ9BR26 566 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 DUSP23Q9BVJ7 150 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 TMPRSS13Q9BYE2 586 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 SPACA1Q9HBV2 294 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 OBP2BQ9NPH6 170 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 NIT2Q9NQR4 276 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 TRAPPC2LQ9UL33 140 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 LSM2Q9Y333 95 aaKnown RBP10.83□□□□□ -0.68
ERBB2-206ENST00000578373 ARHGEF17Q96PE2 2063 aaPredicted RBP10.83□□□□□ -0.68
ERBB2-206ENST00000578373 LRRC37AA6NMS7 1700 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 TMEM200CA6NKL6 621 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 CTAG2O75638 210 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 OR2F2O95006 317 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 CHATP28329 748 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 PEBP1P30086 187 aaKnown RBP10.83□□□□□ -0.68
ERBB2-206ENST00000578373 CD96P40200 585 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 RPL23AP62750 156 aaKnown RBP10.83□□□□□ -0.68
ERBB2-206ENST00000578373 FUT5Q11128 374 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 OR2F1Q13607 317 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 BATFQ16520 125 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 HAGHQ16775 308 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 CLLU1Q5K131 121 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 C1QTNF12Q5T7M4 302 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 VHLLQ6RSH7 139 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 TMEM182Q6ZP80 229 aaPredicted RBP10.83□□□□□ -0.68
ERBB2-206ENST00000578373 SGK3Q96BR1 496 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 ARL5BQ96KC2 179 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 ALKBH3Q96Q83 286 aaPredicted RBP10.83□□□□□ -0.68
ERBB2-206ENST00000578373 SCPEP1Q9HB40 452 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 DNAJB11Q9UBS4 358 aa10.83□□□□□ -0.68
ERBB2-206ENST00000578373 NOSIPQ9Y314 301 aaKnown RBP10.83□□□□□ -0.68
ERBB2-206ENST00000578373 DCTN6O00399 190 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 SPRY1O43609 319 aaPredicted RBP10.82□□□□□ -0.68
ERBB2-206ENST00000578373 SEMG1P04279 462 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 ZGLP1P0C6A0 271 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 RNF4P78317 190 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 RIPPLY1Q0D2K3 151 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 EMC4Q5J8M3 183 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 OR2B11Q5JQS5 317 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 DGAT2L6Q6ZPD8 337 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 MISPQ8IVT2 679 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 FRRS1LQ9P0K9 344 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 PADI1Q9ULC6 663 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 TDRD15B5MCY1 1934 aaKnown RBP10.82□□□□□ -0.68
ERBB2-206ENST00000578373 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.82□□□□□ -0.68
ERBB2-206ENST00000578373 C4orf51C9J302 202 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 KCNAB3O43448 404 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 ACTL6BO94805 426 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 TPPPO94811 219 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 APOBEC1P41238 236 aaKnown RBP10.82□□□□□ -0.68
ERBB2-206ENST00000578373 ACTBL2Q562R1 376 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 SLC22A25Q6T423 547 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 PGAP1Q75T13 922 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 SLC38A6Q8IZM9 456 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 NPEPL1Q8NDH3 523 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 OR52N4Q8NGI2 321 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 AKR7LQ8NHP1 331 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 LINC00052Q96N35 136 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 GNRHR2Q96P88 292 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 CHST6Q9GZX3 395 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 S1PR5Q9H228 398 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 SH3BGRL2Q9UJC5 107 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 FAM96BQ9Y3D0 163 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 TMEM272A0A1B0GTI8 110 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 CEBPZOSA8MTT3 80 aa10.82□□□□□ -0.68
ERBB2-206ENST00000578373 IGHA1P01876 353 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms