RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 ZNRD1Q9P1U0 126 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 SNX13Q9Y5W8 968 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 A0A0G2JND7 137 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 ZNF816-ZNF321PA0A0X1KG74 233 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 G3V4G9 280 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 DVL1O14640 695 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 OR10H3O60404 316 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 PTBP3O95758 552 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 GYPAP02724 150 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 OPN1MWP04001 364 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 OPN1MW2P0DN77 364 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 OPN1MW3P0DN78 364 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 EEF1B2P24534 225 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 HOXA4Q00056 320 aaPredicted RBP9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 GUCA2AQ02747 115 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 MZT1Q08AG7 82 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 MAPRE2Q15555 327 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 KRTAP27-1Q3LI81 207 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 IFI44LQ53G44 452 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 KPRPQ5T749 579 aaPredicted RBP9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 TBPL2Q6SJ96 375 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 Q6ZTK2 550 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 PTCHD4Q6ZW05 846 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 VMO1Q7Z5L0 202 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 VTCN1Q7Z7D3 282 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 CYP4Z1Q86W10 505 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 CMTM4Q8IZR5 234 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 OR2AJ1Q8NGZ0 328 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 ST8SIA4Q92187 359 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 RASSF4Q9H2L5 321 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 CNTD2Q9H8S5 307 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 INTS9Q9NV88 658 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 GID8Q9NWU2 228 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 ONECUT1Q9UBC0 465 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 RPUSD1Q9UJJ7 312 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 SIGLEC7Q9Y286 467 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 IER3IP1Q9Y5U9 82 aa9.6□□□□□ -0.87
CTDNEP1-212ENST00000576613 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 hCG_1807616A0A1W2PRN6 198 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 ANKRD61A6NGH8 418 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 A6NLC8 198 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 CD300LBA8K4G0 201 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 IMPA2O14732 288 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 PPP1R3DO95685 299 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 ZNF682O95780 498 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 PAHP00439 452 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 GGT2P36268 569 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 MDH1P40925 334 aaKnown RBP9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 TPTEP56180 551 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 TRAP1Q12931 704 aaKnown RBP9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 FAM189A2Q15884 450 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 RSPO1Q2MKA7 263 aaPredicted RBP9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 SLC36A3Q495N2 470 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 SLC18B1Q6NT16 456 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 METAP1DQ6UB28 335 aaPredicted RBP9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 DPY19L2P2Q6ZN68 376 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 Q6ZPA2 131 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 CFAP77Q6ZQR2 320 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 FKBP9P1Q75LS8 142 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 FAM90A1Q86YD7 464 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 SPERTQ8NA61 448 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 SLC26A10Q8NG04 563 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 OR5R1Q8NH85 324 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 ATP6V1G3Q96LB4 118 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 TSSK2Q96PF2 358 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 TMEM120AQ9BXJ8 343 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 KRCC1Q9NPI7 259 aaPredicted RBP9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 C1orf123Q9NWV4 160 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 MRPL15Q9P015 296 aaKnown RBP9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 KAAG1Q9UBP8 84 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 NBEAL2Q6ZNJ1 2754 aa9.59□□□□□ -0.87
CTDNEP1-212ENST00000576613 IGLV1-36A0A0B4J1U3 117 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 GGT3PA6NGU5 568 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 M0R135 149 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 DCTN6O00399 190 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 PTP4A3O75365 173 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 TXNDC12O95881 172 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 RENP00797 406 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 GRPP07492 148 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 GABRA5P31644 462 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 CDKN2AP42771 156 aaKnown RBP9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 HERPUD1Q15011 391 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 SAMD5Q5TGI4 173 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 C11orf88Q6PI97 169 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 TSEN54Q7Z6J9 526 aaKnown RBP9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 LINC00346Q8IVM7 164 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 GCSAMQ8N6F7 178 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 SLC7A13Q8TCU3 470 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 SPTSSAQ969W0 71 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 PPP1R14AQ96A00 147 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 ZNF799Q96GE5 643 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 RSRC1Q96IZ7 334 aaKnown RBP9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 DMRTB1Q96MA1 342 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 SEMA6AQ9H2E6 1030 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 SRA1Q9HD15 236 aaKnown RBP9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 C14orf119Q9NWQ9 140 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 FBLN5Q9UBX5 448 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 B9D1Q9UPM9 204 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 AP3M1Q9Y2T2 418 aa9.58□□□□□ -0.88
CTDNEP1-212ENST00000576613 A0A1W2PRQ8 180 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms