RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 TAF13Q15543 124 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 RSPO1Q2MKA7 263 aaPredicted RBP7.4□□□□□ -1.22
PRPF8-213ENST00000576407 ESCO2Q56NI9 601 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 ZNF684Q5T5D7 378 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 SP5Q6BEB4 398 aaPredicted RBP7.4□□□□□ -1.22
PRPF8-213ENST00000576407 KCTD18Q6PI47 426 aaPredicted RBP7.4□□□□□ -1.22
PRPF8-213ENST00000576407 TMEM108Q6UXF1 575 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 KRT77Q7Z794 578 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 LHFPL3Q86UP9 236 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 ZNF679Q8IYX0 411 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 PAQR4Q8N4S7 273 aaPredicted RBP7.4□□□□□ -1.22
PRPF8-213ENST00000576407 SLC30A7Q8NEW0 376 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 OR6F1Q8NGZ6 308 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 LILRB1Q8NHL6 650 aaPredicted RBP7.4□□□□□ -1.22
PRPF8-213ENST00000576407 LHFPL5Q8TAF8 219 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 SNX33Q8WV41 574 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 IPCEF1Q8WWN9 437 aaPredicted RBP7.4□□□□□ -1.22
PRPF8-213ENST00000576407 PSMG3-AS1Q96PY0 264 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 OR8B4Q96RC9 309 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 SPOCK3Q9BQ16 436 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 UQCC2Q9BRT2 126 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 ZNF649Q9BS31 505 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 NIPAL2Q9H841 368 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 INPP5EQ9NRR6 644 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 ERVK13-1Q9NX77 482 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 CCDC59Q9P031 241 aaKnown RBP7.4□□□□□ -1.22
PRPF8-213ENST00000576407 ERVK-18Q9QC07 812 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 IKZF2Q9UKS7 526 aa7.4□□□□□ -1.22
PRPF8-213ENST00000576407 UTP20O75691 2785 aaKnown RBP7.39□□□□□ -1.23
PRPF8-213ENST00000576407 IGHV2OR16-5A0A0B4J2B6 119 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.39□□□□□ -1.23
PRPF8-213ENST00000576407 METTL15A6NJ78 407 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 DEFB108AA8MXU0 73 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 F5H5K5 113 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 SIAH2O43255 324 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 RGS10O43665 173 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 ZNF254O75437 659 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 CRYAAP02489 173 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 ZNF35P13682 527 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 MYL12AP19105 171 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 CCNOP22674 350 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 PTAFRP25105 342 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 HSD11B1P28845 292 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 CALCRP30988 508 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 OTX1P32242 354 aaPredicted RBP7.39□□□□□ -1.23
PRPF8-213ENST00000576407 TALDO1P37837 337 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 OR3A3P47888 321 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 PRKXP51817 358 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 CDH15P55291 814 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 OR12D2P58182 307 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 ACTA2P62736 377 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 GRB2P62993 217 aaKnown RBP7.39□□□□□ -1.23
PRPF8-213ENST00000576407 ACTG2P63267 376 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 NAAAQ02083 359 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 HGFACQ04756 655 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 SPOCK1Q08629 439 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 CTF1Q16619 201 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 TBC1D28Q2M2D7 210 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 KRTAP27-1Q3LI81 207 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 YIF1BQ5BJH7 314 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 BEX5Q5H9J7 111 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 NCMAPQ5T1S8 102 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 XAF1Q6GPH4 301 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 DEGS2Q6QHC5 323 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.39□□□□□ -1.23
PRPF8-213ENST00000576407 LYSMD2Q8IV50 215 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 IL17RDQ8NFM7 739 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 OR1J2Q8NGS2 313 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 SPTSSAQ969W0 71 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 PLPPR2Q96GM1 343 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 SIGLEC11Q96RL6 698 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 KCNJ15Q99712 375 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 ALG8Q9BVK2 526 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 CDCA4Q9BXL8 241 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 ESRP2Q9H6T0 727 aaKnown RBP7.39□□□□□ -1.23
PRPF8-213ENST00000576407 ISG20L2Q9H9L3 353 aaKnown RBP7.39□□□□□ -1.23
PRPF8-213ENST00000576407 ELOVL3Q9HB03 270 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 CDH20Q9HBT6 801 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 PTTG3PQ9NZH4 202 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 CLEC2DQ9UHP7 191 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 MRM2Q9UI43 246 aaKnown RBP7.39□□□□□ -1.23
PRPF8-213ENST00000576407 EXOSC1Q9Y3B2 195 aaKnown RBP7.39□□□□□ -1.23
PRPF8-213ENST00000576407 LRP12Q9Y561 859 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 PEX16Q9Y5Y5 336 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 PRR14LQ5THK1 2151 aa7.39□□□□□ -1.23
PRPF8-213ENST00000576407 ANKHD1Q8IWZ3 2542 aaKnown RBP7.38□□□□□ -1.23
PRPF8-213ENST00000576407 HMX3A6NHT5 357 aa7.38□□□□□ -1.23
PRPF8-213ENST00000576407 ATP6V1G2-DDX39BF2Z307 99 aa7.38□□□□□ -1.23
PRPF8-213ENST00000576407 J3QLW9 94 aa7.38□□□□□ -1.23
PRPF8-213ENST00000576407 M0R135 149 aa7.38□□□□□ -1.23
PRPF8-213ENST00000576407 ABCD4O14678 606 aa7.38□□□□□ -1.23
PRPF8-213ENST00000576407 ABHD16AO95870 558 aa7.38□□□□□ -1.23
PRPF8-213ENST00000576407 MT-ND2P03891 347 aa7.38□□□□□ -1.23
PRPF8-213ENST00000576407 HTR1AP08908 422 aa7.38□□□□□ -1.23
PRPF8-213ENST00000576407 ACSM4P0C7M7 580 aa7.38□□□□□ -1.23
PRPF8-213ENST00000576407 ZNF19P17023 458 aa7.38□□□□□ -1.23
PRPF8-213ENST00000576407 COL8A1P27658 744 aa7.38□□□□□ -1.23
PRPF8-213ENST00000576407 WNT5AP41221 380 aa7.38□□□□□ -1.23
PRPF8-213ENST00000576407 SLC6A9P48067 706 aa7.38□□□□□ -1.23
PRPF8-213ENST00000576407 CX3CR1P49238 355 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms