RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 AURKCQ9UQB9 309 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 ADAM18Q9Y3Q7 739 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 A6NLC8 198 aa13.26□□□□□ -0.29
CTDNEP1-211ENST00000575783 ADARB2-AS1A8MUL3 147 aa13.26□□□□□ -0.29
CTDNEP1-211ENST00000575783 SLC16A7O60669 478 aa13.26□□□□□ -0.29
CTDNEP1-211ENST00000575783 ZNF26P17031 533 aaPredicted RBP13.26□□□□□ -0.29
CTDNEP1-211ENST00000575783 UBE2E1P51965 193 aa13.26□□□□□ -0.29
CTDNEP1-211ENST00000575783 MALLQ13021 153 aa13.26□□□□□ -0.29
CTDNEP1-211ENST00000575783 HABP2Q14520 560 aaPredicted RBP13.26□□□□□ -0.29
CTDNEP1-211ENST00000575783 OAFQ86UD1 273 aa13.26□□□□□ -0.29
CTDNEP1-211ENST00000575783 GCSAMQ8N6F7 178 aa13.26□□□□□ -0.29
CTDNEP1-211ENST00000575783 SLC7A13Q8TCU3 470 aa13.26□□□□□ -0.29
CTDNEP1-211ENST00000575783 Q96M85 177 aa13.26□□□□□ -0.29
CTDNEP1-211ENST00000575783 COQ7Q99807 217 aa13.26□□□□□ -0.29
CTDNEP1-211ENST00000575783 B9D2Q9BPU9 175 aa13.26□□□□□ -0.29
CTDNEP1-211ENST00000575783 ADAT1Q9BUB4 502 aaKnown RBP13.26□□□□□ -0.29
CTDNEP1-211ENST00000575783 RPS6KA6Q9UK32 745 aa13.26□□□□□ -0.29
CTDNEP1-211ENST00000575783 A0A1W2PRX2 142 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 PRSS37A4D1T9 235 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 F5H5K5 113 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 KHDRBS3O75525 346 aaKnown RBP13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 LCATP04180 440 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 PAX6P26367 422 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 OR1E2P47887 323 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 CENPAP49450 140 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 CRYBA2P53672 197 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 WDR4P57081 412 aaKnown RBP13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 ACSM1Q08AH1 577 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 ECH1Q13011 328 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 IKZF1Q13422 519 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 RSPO1Q2MKA7 263 aaPredicted RBP13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 AGKQ53H12 422 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 MESTQ5EB52 335 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 CORO6Q6QEF8 472 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 COLCA1Q6ZS62 124 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 NAA40Q86UY6 237 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 DTX3Q8N9I9 347 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 PLPP7Q8NBV4 271 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 GJC3Q8NFK1 279 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 RASSF5Q8WWW0 418 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 H1FXQ92522 213 aaKnown RBP13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 TNFRSF14Q92956 283 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 SLC22A4Q9H015 551 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 HDHD2Q9H0R4 259 aa13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 NOP16Q9Y3C1 178 aaKnown RBP13.25□□□□□ -0.29
CTDNEP1-211ENST00000575783 NDUFB3O43676 98 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 GMDSO60547 372 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 SLC9A3P48764 834 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 MRPL19P49406 292 aaKnown RBP13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 COL10A1Q03692 680 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 FHL1Q13642 323 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 MICBQ29980 383 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 LRRC75BQ2VPJ9 315 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 WDR38Q5JTN6 314 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 TEX36Q5VZQ5 186 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 CRIP3Q6Q6R5 217 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 EPGNQ6UW88 154 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 MRPL21Q7Z2W9 205 aaKnown RBP13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 FAM216BQ8N7L0 139 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 OR13C2Q8NGS9 318 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 OR5M11Q96RB7 305 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 POLR2J2Q9GZM3 115 aaKnown RBP13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 POLR2J3Q9H1A7 115 aaKnown RBP13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 SYT4Q9H2B2 425 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 SERTAD4Q9NUC0 356 aa13.24□□□□□ -0.29
CTDNEP1-211ENST00000575783 SACSQ9NZJ4 4579 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 DYNC2H1Q8NCM8 4307 aaKnown RBP13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 CD300LBA8K4G0 201 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 EFCAB9A8MZ26 197 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 IMPA2O14732 288 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 POLR3GO15318 223 aaPredicted RBP13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 AHCYL1O43865 530 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 CHST1O43916 411 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 PEX14O75381 377 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 PTBP3O95758 552 aaKnown RBP13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 LHBP01229 141 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 ACSM4P0C7M7 580 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 BMXP51813 675 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 VSNL1P62760 191 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 MEP1BQ16820 701 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 NCR3LG1Q68D85 454 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 DHDDSQ86SQ9 333 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 NRMQ8IXM6 262 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 OR10A6Q8NH74 314 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 ACOT11Q8WXI4 607 aaPredicted RBP13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 ZNF570Q96NI8 536 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 DCTN5Q9BTE1 182 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 ZNF702PQ9H963 129 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 BAG5Q9UL15 447 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 PRPF19Q9UMS4 504 aaKnown RBP13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 LHFPL6Q9Y693 200 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 CAPN7Q9Y6W3 813 aa13.23□□□□□ -0.29
CTDNEP1-211ENST00000575783 CD14P08571 375 aa13.22□□□□□ -0.29
CTDNEP1-211ENST00000575783 HOXD3P31249 432 aaPredicted RBP13.22□□□□□ -0.29
CTDNEP1-211ENST00000575783 HIST1H3AP68431 136 aa13.22□□□□□ -0.29
CTDNEP1-211ENST00000575783 HIST2H3PS2Q5TEC6 136 aa13.22□□□□□ -0.29
CTDNEP1-211ENST00000575783 HIST2H3AQ71DI3 136 aa13.22□□□□□ -0.29
CTDNEP1-211ENST00000575783 SLC36A1Q7Z2H8 476 aa13.22□□□□□ -0.29
CTDNEP1-211ENST00000575783 PAPD5Q8NDF8 572 aaKnown RBP13.22□□□□□ -0.29
CTDNEP1-211ENST00000575783 DMRTB1Q96MA1 342 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms