RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ZNF20P17024 532 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 TBPP20226 339 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 CDAP32320 146 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 HRH1P35367 487 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 CASRP41180 1078 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 OR2F1Q13607 317 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 INPP5JQ15735 1006 aaPredicted RBP7.92□□□□□ -1.14
NCBP3-204ENST00000574911 HIST3H3Q16695 136 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 AWAT2Q6E213 333 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 OR2W3Q7Z3T1 314 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 RTN4RL2Q86UN3 420 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 SPERTQ8NA61 448 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 OR8B12Q8NGG6 310 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 OR2AJ1Q8NGZ0 328 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 ST8SIA4Q92187 359 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 SELENOIQ9C0D9 397 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 LPAR5Q9H1C0 372 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 SEC61A2Q9H9S3 476 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 IFT46Q9NQC8 304 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 RARRES3Q9UL19 164 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 PLEKHA6Q9Y2H5 1048 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 KCNK7Q9Y2U2 307 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 A0A0C4DFX4 3053 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 LY6G6EA0A0G2JKS1 128 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 A0A1W2PNR3 127 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 OR2AT4A6NND4 320 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 D6RAR5 112 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 CCSO14618 274 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 BCL2L11O43521 198 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 ABOP16442 354 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 CCL1P22362 96 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 GABREP78334 506 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 KIF26BQ2KJY2 2108 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 PTCRAQ6ISU1 281 aaPredicted RBP7.92□□□□□ -1.14
NCBP3-204ENST00000574911 LCN10Q6JVE6 187 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 GUSBP11Q6P575 273 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 FADS6Q8N9I5 356 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 ADAD2Q8NCV1 583 aaKnown RBP7.92□□□□□ -1.14
NCBP3-204ENST00000574911 C1orf147Q96MC9 270 aaPredicted RBP7.92□□□□□ -1.14
NCBP3-204ENST00000574911 OXGR1Q96P68 337 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 OR5B2Q96R09 309 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 NICN1Q9BSH3 213 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 SOX7Q9BT81 388 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 TMEM185BQ9H7F4 350 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 FN3KRPQ9HA64 309 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 RASL12Q9NYN1 266 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 ZNF319Q9P2F9 582 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 U3KQA8 63 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 ALPK2Q86TB3 2170 aa7.92□□□□□ -1.14
NCBP3-204ENST00000574911 IGHV5-10-1A0A0J9YXX1 117 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 A0A1W2PQM1 296 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 LGALS8O00214 317 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 BET1O15155 118 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 SMAD9O15198 467 aaKnown RBP7.91□□□□□ -1.14
NCBP3-204ENST00000574911 EFSO43281 561 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 ZNF17P17021 662 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 NAT1P18440 290 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 PRKXP51817 358 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 ZNF121P58317 390 aaPredicted RBP7.91□□□□□ -1.14
NCBP3-204ENST00000574911 CCL7P80098 99 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 TAGLNQ01995 201 aaKnown RBP7.91□□□□□ -1.14
NCBP3-204ENST00000574911 TAF13Q15543 124 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 SMAD2Q15796 467 aaKnown RBP7.91□□□□□ -1.14
NCBP3-204ENST00000574911 CARD17Q5XLA6 110 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 TMEM81Q6P7N7 255 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 GLIPR1L1Q6UWM5 242 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 PGAP1Q75T13 922 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.91□□□□□ -1.14
NCBP3-204ENST00000574911 WDSUB1Q8N9V3 476 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 RELL2Q8NC24 303 aaPredicted RBP7.91□□□□□ -1.14
NCBP3-204ENST00000574911 PXT1Q8NFP0 134 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 SLC22A8Q8TCC7 542 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 SEC22AQ96IW7 307 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 PHB2Q99623 299 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 PDCD10Q9BUL8 212 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 WDR13Q9H1Z4 485 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 COMMD9Q9P000 198 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 GPR160Q9UJ42 338 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 MRPS28Q9Y2Q9 187 aaKnown RBP7.91□□□□□ -1.14
NCBP3-204ENST00000574911 POLR1DQ9Y2S0 133 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 BRWD1Q9NSI6 2320 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 LOC100509620A0A075B734 347 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 LOC102725191A0A1B0GVB3 256 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 RNF222A6NCQ9 220 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 K7ESF4 209 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 CDC14BO60729 498 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 RAMP1O60894 148 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 PMP2P02689 132 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 GSTP1P09211 210 aaKnown RBP7.91□□□□□ -1.14
NCBP3-204ENST00000574911 ANOS1P23352 680 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 ATP1B3P54709 279 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 IL13RA1P78552 427 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 PLAC9Q5JTB6 97 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 ACOT7LQ6ZUV0 252 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 HOGA1Q86XE5 327 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 ZNF101Q8IZC7 436 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 OR2I1PQ8NGU4 316 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 PPP1R1CQ8WVI7 109 aa7.91□□□□□ -1.14
NCBP3-204ENST00000574911 SPACA9Q96E40 222 aaPredicted RBP7.91□□□□□ -1.14
NCBP3-204ENST00000574911 RASL10BQ96S79 203 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms