RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 CLEC2DQ9UHP7 191 aa14.68□□□□□ -0.06
NUP88-210ENST00000574867 N6AMT1Q9Y5N5 214 aa14.68□□□□□ -0.06
NUP88-210ENST00000574867 ROS1P08922 2347 aa14.68□□□□□ -0.06
NUP88-210ENST00000574867 IGLV3-9A0A075B6K5 115 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 ATE1O95260 518 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 PRF1P14222 555 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 RAC2P15153 192 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 EVX1P49640 407 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 TIGD6Q17RP2 521 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 GLYATL3Q5SZD4 288 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 AGAP6Q5VW22 663 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 FDX2Q6P4F2 183 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 OR8B12Q8NGG6 310 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 SGCDQ92629 289 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 MND1Q9BWT6 205 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 POFUT1Q9H488 388 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 G6PC2Q9NQR9 355 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 OR52A1Q9UKL2 312 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 GTF2A1LQ9UNN4 478 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 A0A0U1RQV5 110 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 B9A039 149 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 PNPP00491 289 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 HTR1AP08908 422 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 DANCRP0C864 163 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 GBX2P52951 348 aaPredicted RBP14.67□□□□□ -0.06
NUP88-210ENST00000574867 KCTD21Q4G0X4 260 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 OR2G6Q5TZ20 316 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 MRPL21Q7Z2W9 205 aaKnown RBP14.67□□□□□ -0.06
NUP88-210ENST00000574867 DTX2Q86UW9 622 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 CATSPERDQ86XM0 798 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 SPRYD4Q8WW59 207 aaPredicted RBP14.67□□□□□ -0.06
NUP88-210ENST00000574867 SPSB4Q96A44 273 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 MRPL37Q9BZE1 423 aaKnown RBP14.67□□□□□ -0.06
NUP88-210ENST00000574867 CCDC90BQ9GZT6 254 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 FBXO9Q9UK97 447 aaPredicted RBP14.67□□□□□ -0.06
NUP88-210ENST00000574867 CRYBG3Q68DQ2 2970 aa14.67□□□□□ -0.06
NUP88-210ENST00000574867 DCHS2Q6V1P9 2916 aa14.66□□□□□ -0.06
NUP88-210ENST00000574867 MT-ND2P03891 347 aa14.66□□□□□ -0.06
NUP88-210ENST00000574867 WNT4P56705 351 aa14.66□□□□□ -0.06
NUP88-210ENST00000574867 GK2Q14410 553 aaPredicted RBP14.66□□□□□ -0.06
NUP88-210ENST00000574867 IRF3Q14653 427 aa14.66□□□□□ -0.06
NUP88-210ENST00000574867 MSMPQ1L6U9 139 aa14.66□□□□□ -0.06
NUP88-210ENST00000574867 PGAP1Q75T13 922 aa14.66□□□□□ -0.06
NUP88-210ENST00000574867 ELMOD2Q8IZ81 293 aa14.66□□□□□ -0.06
NUP88-210ENST00000574867 NANOGP1Q8N7R0 232 aa14.66□□□□□ -0.06
NUP88-210ENST00000574867 TRIM36Q9NQ86 728 aa14.66□□□□□ -0.06
NUP88-210ENST00000574867 CBLN4Q9NTU7 201 aa14.66□□□□□ -0.06
NUP88-210ENST00000574867 IGHV3-13P01766 116 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 SELEP16581 610 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 ANOS1P23352 680 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 MPV17P39210 176 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 PSMB10P40306 273 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 TGM4P49221 684 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 CCR9P51686 369 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 CHN2P52757 468 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 MOGQ16653 247 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 CCDC58Q4VC31 144 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 OR2G2Q8NGZ5 317 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 OR2AE1Q8NHA4 323 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 REEP6Q96HR9 211 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 SYT3Q9BQG1 590 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 ZNF319Q9P2F9 582 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 CGGBP1Q9UFW8 167 aaPredicted RBP14.65□□□□□ -0.06
NUP88-210ENST00000574867 DUSP13Q9UII6 198 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 FZR1Q9UM11 496 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 EDARQ9UNE0 448 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 UNC79Q9P2D8 2635 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 A0A1W2PPW3 197 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 C5orf63A6NC05 138 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 TNFAIP8O95379 198 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 KITLGP21583 273 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 TAS2R43P59537 309 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 ZNF92Q03936 586 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 HLXQ14774 488 aaPredicted RBP14.65□□□□□ -0.06
NUP88-210ENST00000574867 GFOD2Q3B7J2 385 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 WDR38Q5JTN6 314 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 PAMR1Q6UXH9 720 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 ZNF485Q8NCK3 441 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 ITFG2Q969R8 447 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 RNF166Q96A37 237 aaPredicted RBP14.65□□□□□ -0.06
NUP88-210ENST00000574867 SGK3Q96BR1 496 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 HAVCR1Q96D42 359 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 CMBLQ96DG6 245 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 REPIN1Q9BWE0 567 aaKnown RBP14.65□□□□□ -0.06
NUP88-210ENST00000574867 BABAM2Q9NXR7 383 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 GPR160Q9UJ42 338 aa14.65□□□□□ -0.06
NUP88-210ENST00000574867 TTRP02766 147 aa14.64□□□□□ -0.07
NUP88-210ENST00000574867 UBCP0CG48 685 aaKnown RBP14.64□□□□□ -0.07
NUP88-210ENST00000574867 BMP4P12644 408 aa14.64□□□□□ -0.07
NUP88-210ENST00000574867 SNRPD2P62316 118 aaKnown RBP14.64□□□□□ -0.07
NUP88-210ENST00000574867 PSG7Q13046 419 aa14.64□□□□□ -0.07
NUP88-210ENST00000574867 TBCEQ15813 527 aaPredicted RBP14.64□□□□□ -0.07
NUP88-210ENST00000574867 KLBQ86Z14 1044 aa14.64□□□□□ -0.07
NUP88-210ENST00000574867 GATAD2BQ8WXI9 593 aa14.64□□□□□ -0.07
NUP88-210ENST00000574867 TRAF4Q9BUZ4 470 aaPredicted RBP14.64□□□□□ -0.07
NUP88-210ENST00000574867 CENPEQ02224 2701 aa14.64□□□□□ -0.07
NUP88-210ENST00000574867 TRIM64A6NGJ6 449 aa14.64□□□□□ -0.07
NUP88-210ENST00000574867 CLPTM1O96005 669 aa14.64□□□□□ -0.07
NUP88-210ENST00000574867 IGLV3-1P01715 115 aa14.64□□□□□ -0.07
NUP88-210ENST00000574867 SOD3P08294 240 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms