RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 FBXL17Q9UF56 701 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 SERGEFQ9UGK8 458 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 GPR132Q9UNW8 380 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 MMP24Q9Y5R2 645 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 CHD7Q9P2D1 2997 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 LOC107986453A0A1B0GWG9 222 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 SLC16A7O60669 478 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 OR2C1O95371 312 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 APBB3O95704 486 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 PVRP15151 417 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 ZNF10P21506 573 aaPredicted RBP12.86□□□□□ -0.35
SMG6-215ENST00000574501 DRD3P35462 400 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 CLDN6P56747 220 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 ZP2Q05996 745 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 TAF8Q7Z7C8 310 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 POC1AQ8NBT0 407 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 OR1J1Q8NGS3 322 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 MAFIPQ8WZ33 124 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 C2orf50Q96LR7 162 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 NICN1Q9BSH3 213 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 SDHAF3Q9NRP4 125 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 GFOD1Q9NXC2 390 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 TBC1D29Q9UFV1 150 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 FBXO7Q9Y3I1 522 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 HSPB2A8KAH6 182 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 H0YGG7 62 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 TAAR5O14804 337 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 MPZL1O95297 269 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 FSTP19883 344 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 RPL12P30050 165 aaKnown RBP12.85□□□□□ -0.35
SMG6-215ENST00000574501 ACTR1BP42025 376 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 WASP42768 502 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 ARF3P61204 181 aaPredicted RBP12.85□□□□□ -0.35
SMG6-215ENST00000574501 PDGFRLQ15198 375 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 HSPB2Q16082 182 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 C1orf100Q5SVJ3 147 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 ATG4DQ86TL0 474 aaPredicted RBP12.85□□□□□ -0.35
SMG6-215ENST00000574501 CCDC54Q8NEL0 328 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 OR52N4Q8NGI2 321 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 TAAR8Q969N4 342 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 JSRP1Q96MG2 331 aaPredicted RBP12.85□□□□□ -0.35
SMG6-215ENST00000574501 TGM7Q96PF1 710 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 LMF2Q9BU23 707 aaKnown RBP12.85□□□□□ -0.35
SMG6-215ENST00000574501 SCRT1Q9BWW7 348 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 TGIF2Q9GZN2 237 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 PRO1933Q9H354 126 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 PTGES2Q9H7Z7 377 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 LMAN1LQ9HAT1 526 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 DOK5Q9P104 306 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 DNAJB11Q9UBS4 358 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 HHLA2Q9UM44 414 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 RHBDD3Q9Y3P4 386 aa12.85□□□□□ -0.35
SMG6-215ENST00000574501 PUS1Q9Y606 427 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMG6-215ENST00000574501 MEGF11A6BM72 1044 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 XKRYO14609 159 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 GLRA1P23415 457 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 FCGR2CP31995 323 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 RBP2P50120 134 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 RPS23P62266 143 aaKnown RBP12.84□□□□□ -0.35
SMG6-215ENST00000574501 CD226Q15762 336 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 LHX8Q68G74 356 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 HEPN1Q6WQI6 88 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 ZNF574Q6ZN55 896 aaPredicted RBP12.84□□□□□ -0.35
SMG6-215ENST00000574501 COX15Q7KZN9 410 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 CA13Q8N1Q1 262 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 PNLDC1Q8NA58 520 aaKnown RBP12.84□□□□□ -0.35
SMG6-215ENST00000574501 LYPD6BQ8NI32 183 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 PHOSPHO2Q8TCD6 241 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 VSTM2LQ96N03 204 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 ASB16Q96NS5 453 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 ABHD6Q9BV23 337 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 HDAC8Q9BY41 377 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 KIR3DX1Q9H7L2 352 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 K7EPK0 472 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 P2RY10O00398 339 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 C1QL1O75973 258 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 PET100P0DJ07 73 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 VSIG8P0DPA2 414 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 GNALP38405 381 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 TMEM33P57088 247 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 DEFB103AP81534 67 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 EMC4Q5J8M3 183 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 GFI1BQ5VTD9 330 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 C1QL3Q5VWW1 255 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 WBP2NLQ6ICG8 309 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 FIGLAQ6QHK4 219 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 FAM71E2Q8N5Q1 922 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 BCORP1Q8N888 145 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 MR1Q95460 341 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 PTX4Q96A99 478 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 FGGYQ96C11 551 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 C8orf44Q96CB5 159 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 RTBDNQ9BSG5 229 aaPredicted RBP12.84□□□□□ -0.35
SMG6-215ENST00000574501 ZBP1Q9H171 429 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 FREM3P0C091 2139 aa12.84□□□□□ -0.35
SMG6-215ENST00000574501 ZNF727A8MUV8 499 aa12.83□□□□□ -0.35
SMG6-215ENST00000574501 CD37P11049 281 aa12.83□□□□□ -0.35
SMG6-215ENST00000574501 ZNF708P17019 499 aa12.83□□□□□ -0.35
SMG6-215ENST00000574501 RAP1AP62834 184 aa12.83□□□□□ -0.35
SMG6-215ENST00000574501 GAMTQ14353 236 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms