RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	NIPAL2	Q9H841	368 aa		12.37	□□□□□ -0.43
ABR-223	ENST00000573895	MYOZ1	Q9NP98	299 aa	Predicted RBP	12.37	□□□□□ -0.43
ABR-223	ENST00000573895	BABAM2	Q9NXR7	383 aa		12.37	□□□□□ -0.43
ABR-223	ENST00000573895	ASH2L	Q9UBL3	628 aa		12.37	□□□□□ -0.43
ABR-223	ENST00000573895	COPS3	Q9UNS2	423 aa		12.37	□□□□□ -0.43
ABR-223	ENST00000573895	CMAHP	Q9Y471	501 aa		12.37	□□□□□ -0.43
ABR-223	ENST00000573895	RNF223	E7ERA6	249 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895		J3QLW9	94 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	MMP7	P09237	267 aa	Predicted RBP	12.36	□□□□□ -0.43
ABR-223	ENST00000573895	SLC25A16	P16260	332 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	ZNF19	P17023	458 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	DCTD	P32321	178 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	RPS27	P42677	84 aa	Known RBP	12.36	□□□□□ -0.43
ABR-223	ENST00000573895	MAP2K4	P45985	399 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	RPL5	P46777	297 aa	Known RBP	12.36	□□□□□ -0.43
ABR-223	ENST00000573895	GBX2	P52951	348 aa	Predicted RBP	12.36	□□□□□ -0.43
ABR-223	ENST00000573895	GALK2	Q01415	458 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	BDH1	Q02338	343 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	RAB39A	Q14964	217 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	KRTAP21-3	Q3LHN1	58 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	SYT6	Q5T7P8	510 aa	Predicted RBP	12.36	□□□□□ -0.43
ABR-223	ENST00000573895	XAF1	Q6GPH4	301 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	CORO6	Q6QEF8	472 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	VHLL	Q6RSH7	139 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	KRT77	Q7Z794	578 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	LINC00346	Q8IVM7	164 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	ZNF485	Q8NCK3	441 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	OR1J2	Q8NGS2	313 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	SLAMF6	Q96DU3	332 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	MAP6	Q96JE9	813 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	COG8	Q96MW5	612 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	DOK1	Q99704	481 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	RNF121	Q9H920	327 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	KLHDC2	Q9Y2U9	406 aa		12.36	□□□□□ -0.43
ABR-223	ENST00000573895	LSM2	Q9Y333	95 aa	Known RBP	12.36	□□□□□ -0.43
ABR-223	ENST00000573895	SON	P18583	2426 aa	Known RBP	12.36	□□□□□ -0.43
ABR-223	ENST00000573895	ZNF878	C9JN71	531 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	NDUFS8	O00217	210 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	SGCE	O43556	437 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	APOC1	P02654	83 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	TFAP2A	P05549	437 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	H2BFM	P0C1H6	154 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	PATE4	P0C8F1	98 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	COX5B	P10606	129 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	RIDA	P52758	137 aa	Known RBP	12.35	□□□□□ -0.43
ABR-223	ENST00000573895	TAS2R43	P59537	309 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	GRB2	P62993	217 aa	Known RBP	12.35	□□□□□ -0.43
ABR-223	ENST00000573895	PLP2	Q04941	152 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	BLMH	Q13867	455 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	MED22	Q15528	200 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	TAF13	Q15543	124 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	CCDC58	Q4VC31	144 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	ELFN2	Q5R3F8	820 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	OR2G6	Q5TZ20	316 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	VASH1	Q7L8A9	365 aa	Predicted RBP	12.35	□□□□□ -0.43
ABR-223	ENST00000573895	SSX6	Q7RTT6	188 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	FAM220A	Q7Z4H9	259 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	SLC30A7	Q8NEW0	376 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	SPRYD4	Q8WW59	207 aa	Predicted RBP	12.35	□□□□□ -0.43
ABR-223	ENST00000573895	GATAD2B	Q8WXI9	593 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	FAM168A	Q92567	244 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	MRPL24	Q96A35	216 aa	Known RBP	12.35	□□□□□ -0.43
ABR-223	ENST00000573895	SORCS2	Q96PQ0	1159 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	MGLL	Q99685	303 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	HDHD2	Q9H0R4	259 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	RAB1B	Q9H0U4	201 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	ELOVL3	Q9HB03	270 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	CENPM	Q9NSP4	180 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	DDX28	Q9NUL7	540 aa	Known RBP	12.35	□□□□□ -0.43
ABR-223	ENST00000573895	ATPIF1	Q9UII2	106 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	IKZF2	Q9UKS7	526 aa		12.35	□□□□□ -0.43
ABR-223	ENST00000573895	JMJD1C	Q15652	2540 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	IGHV4-30-2	A0A087WSY4	118 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	IQCM	A0A1B0GVH7	501 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	RER1	O15258	196 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	ERCC1	P07992	297 aa	Predicted RBP	12.34	□□□□□ -0.43
ABR-223	ENST00000573895	PSKH1	P11801	424 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	ZNF32	P17041	273 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	HOXB4	P17483	251 aa	Predicted RBP	12.34	□□□□□ -0.43
ABR-223	ENST00000573895	PCSK6	P29122	969 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	OPRL1	P41146	370 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	ALDH3B2	P48448	385 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	TGM4	P49221	684 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	OR12D2	P58182	307 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	PSG4	Q00888	419 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	MLLT11	Q13015	90 aa	Predicted RBP	12.34	□□□□□ -0.43
ABR-223	ENST00000573895	GPR50	Q13585	617 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	NEDD8	Q15843	81 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	TBC1D28	Q2M2D7	210 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	CCDC92	Q53HC0	331 aa	Predicted RBP	12.34	□□□□□ -0.43
ABR-223	ENST00000573895	OTP	Q5XKR4	325 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	CFAP77	Q6ZQR2	320 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	ZNF525	Q8N782	197 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	YIPF7	Q8N8F6	280 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	C10orf105	Q8TEF2	133 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	NEU4	Q8WWR8	484 aa	Predicted RBP	12.34	□□□□□ -0.43
ABR-223	ENST00000573895	HTRA1	Q92743	480 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	MUL1	Q969V5	352 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	POM121	Q96HA1	1249 aa		12.34	□□□□□ -0.43
ABR-223	ENST00000573895	C4orf36	Q96KX1	117 aa		12.34	□□□□□ -0.43

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