RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ZNF304Q9HCX3 659 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 BRWD1Q9NSI6 2320 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 FER1L5A0AVI2 2057 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 A0A0A6YYD4 124 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 GUCA2BQ16661 112 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 AWAT2Q6E213 333 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 C5orf46Q6UWT4 87 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 SHISA6Q6ZSJ9 500 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 OR5T2Q8NGG2 359 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 OR4K15Q8NH41 348 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 DCUN1D4Q92564 292 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 MICU1Q9BPX6 476 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 HPF1Q9NWY4 346 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 ASXL3Q9C0F0 2248 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 IGHV3-20A0A0C4DH32 117 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 TMEM14DPA8MWL7 114 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 F8VVB4 439 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 F8VWA3 439 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 TLE3Q04726 772 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 GTPBP8Q8N3Z3 284 aaPredicted RBP16.93■□□□□ 0.3
SCARF1-206ENST00000573852 PAQR8Q8TEZ7 354 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 TMEM234Q8WY98 164 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 ROBO4Q8WZ75 1007 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 ADAT1Q9BUB4 502 aaKnown RBP16.93■□□□□ 0.3
SCARF1-206ENST00000573852 TEX13DA0A0J9YY54 714 aaPredicted RBP16.93■□□□□ 0.3
SCARF1-206ENST00000573852 SIGLEC6O43699 453 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 ZNF354AO60765 605 aaPredicted RBP16.93■□□□□ 0.3
SCARF1-206ENST00000573852 SRSF3P84103 164 aaKnown RBP16.93■□□□□ 0.3
SCARF1-206ENST00000573852 ZNF529Q6P280 563 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 TMEM88Q6PEY1 159 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 KLHL24Q6TFL4 600 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 C17orf82Q86X59 251 aaPredicted RBP16.93■□□□□ 0.3
SCARF1-206ENST00000573852 OR5D14Q8NGL3 314 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 MFSD8Q8NHS3 518 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 STOML3Q8TAV4 291 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 CTSFQ9UBX1 484 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 SUSD2Q9UGT4 822 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 VDAC3Q9Y277 283 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 SHISA8B8ZZ34 492 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 H0YIZ8 118 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 ACTL6AO96019 429 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 ZNF93P35789 620 aaPredicted RBP16.93■□□□□ 0.3
SCARF1-206ENST00000573852 EMP2P54851 167 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 MICBQ29980 383 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 TMEM104Q8NE00 496 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 OR51E1Q8TCB6 317 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 MESP1Q9BRJ9 268 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 TPSD1Q9BZJ3 242 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 LPAR5Q9H1C0 372 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 CHST11Q9NPF2 352 aa16.93■□□□□ 0.3
SCARF1-206ENST00000573852 CEP290O15078 2479 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 BIDP55957 195 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 FBXW4P57775 412 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 FLI1Q01543 452 aaPredicted RBP16.92■□□□□ 0.3
SCARF1-206ENST00000573852 LDLRAD3Q86YD5 345 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 ZNF101Q8IZC7 436 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 LINC00518Q8N0U6 118 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 OR10H5Q8NGA6 315 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 ELP5Q8TE02 316 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 NUDT22Q9BRQ3 303 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 SOX7Q9BT81 388 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 CYTL1Q9NRR1 136 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 PRELID3BQ9Y3B1 194 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 TRBV6-7A0A0A0MS04 114 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 A0A0B4J2A0 478 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 OR6C76A6NM76 312 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 FOLR1P15328 257 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 TBPP20226 339 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 BCKDHBP21953 392 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 ARL4DP49703 201 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 OR1D5P58170 312 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 HSD11B2P80365 405 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 FOXK1P85037 733 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 STK11Q15831 433 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 PLAC9Q5JTB6 97 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 TMEM71Q6P5X7 295 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 ZSCAN4Q8NAM6 433 aaPredicted RBP16.92■□□□□ 0.3
SCARF1-206ENST00000573852 OR6S1Q8NH40 331 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 TERB2Q8NHR7 220 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 C5orf34Q96MH7 638 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 NMES1Q9C002 83 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 SAV1Q9H4B6 383 aaPredicted RBP16.92■□□□□ 0.3
SCARF1-206ENST00000573852 PRR13Q9NZ81 148 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 SHPKQ9UHJ6 478 aa16.92■□□□□ 0.3
SCARF1-206ENST00000573852 SOCS1O15524 211 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 CD79AP11912 226 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 TPT1P13693 172 aaKnown RBP16.91■□□□□ 0.3
SCARF1-206ENST00000573852 ABOP16442 354 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 ARMC10Q8N2F6 343 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 BHLHE23Q8NDY6 225 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 SLC30A7Q8NEW0 376 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 THAP3Q8WTV1 239 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-206ENST00000573852 TMEM100Q9NV29 134 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 FBLN5Q9UBX5 448 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 ANKUB1A6NFN9 424 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 H3BML4 177 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 SCGNO76038 276 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 H2AFB1P0C5Y9 115 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 GSK3AP49840 483 aa16.91■□□□□ 0.3
SCARF1-206ENST00000573852 NPY4RP50391 375 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms