RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 SLC22A6Q4U2R8 563 aa9.59□□□□□ -0.87
CCDC40-207ENST00000572253 MFSD8Q8NHS3 518 aa9.59□□□□□ -0.87
CCDC40-207ENST00000572253 KCNG3Q8TAE7 436 aa9.59□□□□□ -0.87
CCDC40-207ENST00000572253 MRPS28Q9Y2Q9 187 aaKnown RBP9.59□□□□□ -0.87
CCDC40-207ENST00000572253 TRBV6-7A0A0A0MS04 114 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 CBX5P45973 191 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 PJVKQ0ZLH3 352 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 PCK2Q16822 640 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 PAQR4Q8N4S7 273 aaPredicted RBP9.58□□□□□ -0.88
CCDC40-207ENST00000572253 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.58□□□□□ -0.88
CCDC40-207ENST00000572253 ST8SIA1Q92185 356 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 GPER1Q99527 375 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 URM1Q9BTM9 101 aaKnown RBP9.58□□□□□ -0.88
CCDC40-207ENST00000572253 FBLN5Q9UBX5 448 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 SFT2D2O95562 160 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 TTRP02766 147 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 AMY2BP19961 511 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 SLC9A3R2Q15599 337 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 PRSS54Q6PEW0 395 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 GLIPR1L1Q6UWM5 242 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 PEG10Q86TG7 708 aaKnown RBP9.58□□□□□ -0.88
CCDC40-207ENST00000572253 OR1N1Q8NGS0 311 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 DDIT4LQ96D03 193 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 ADAT3Q96EY9 351 aaPredicted RBP9.58□□□□□ -0.88
CCDC40-207ENST00000572253 NECAB3Q96P71 396 aaPredicted RBP9.58□□□□□ -0.88
CCDC40-207ENST00000572253 PTGES2Q9H7Z7 377 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 MOB1AQ9H8S9 216 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 CHST11Q9NPF2 352 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 OR2S2Q9NQN1 319 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 TMEM100Q9NV29 134 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 H2AFB1P0C5Y9 115 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 CD79AP11912 226 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 HFEQ30201 348 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 SHEQ5VZ18 495 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 DHRS7BQ6IAN0 325 aaPredicted RBP9.58□□□□□ -0.88
CCDC40-207ENST00000572253 DRAM2Q6UX65 266 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 LYPD6Q86Y78 171 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 C11orf40Q8WZ69 217 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 SEC11CQ9BY50 192 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 ZFP57Q9NU63 452 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 FAM206AQ9NX38 181 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 DHCR7Q9UBM7 475 aaKnown RBP9.58□□□□□ -0.88
CCDC40-207ENST00000572253 FLVCR1Q9Y5Y0 555 aa9.58□□□□□ -0.88
CCDC40-207ENST00000572253 ZNF98A6NK75 572 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 RHPN2P1A8MT19 583 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 S100A9P06702 114 aaKnown RBP9.57□□□□□ -0.88
CCDC40-207ENST00000572253 HCKP08631 526 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 NPY4RP50391 375 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 RAB13P51153 203 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 OR56B1Q8NGI3 324 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 MRGPRFQ96AM1 343 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 KCNK17Q96T54 332 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 TMEM59Q9BXS4 323 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 CHRNA10Q9GZZ6 450 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 ZNF304Q9HCX3 659 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 MED29Q9NX70 200 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 ATPIF1Q9UII2 106 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 KLF2Q9Y5W3 355 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-207ENST00000572253 LRP4O75096 1905 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 LOC101059948A0A1B0GTJ6 334 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 NPIPB13A6NJU9 1138 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 DBX1A6NMT0 343 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 TMEM14DPA8MWL7 114 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 NPIPB4C9JG80 1138 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 FTCDNL1E5RQL4 147 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 RFC3P40938 356 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 APOBEC1P41238 236 aaKnown RBP9.57□□□□□ -0.88
CCDC40-207ENST00000572253 CLDN6P56747 220 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 VAX1Q5SQQ9 334 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 AVPI1Q5T686 147 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 NAA40Q86UY6 237 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 CBLN2Q8IUK8 224 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 CD207Q9UJ71 328 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 WIF1Q9Y5W5 379 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 A0A1W2PPC4 97 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 WIPF3A6NGB9 483 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 VSTM2BA6NLU5 285 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 MS4A18H0YCH9 400 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 ACTL6AO96019 429 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 HIST1H1DP16402 221 aaKnown RBP9.57□□□□□ -0.88
CCDC40-207ENST00000572253 QRFPP83859 136 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 MICBQ29980 383 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 MS4A18Q3C1V0 323 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 SAT2Q96F10 170 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-207ENST00000572253 MICU1Q9BPX6 476 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 HRH4Q9H3N8 390 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 SLC2A4RGQ9NR83 387 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 UQCC1Q9NVA1 299 aa9.57□□□□□ -0.88
CCDC40-207ENST00000572253 ANKUB1A6NFN9 424 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 KCNAB3O43448 404 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 FPR2P25090 351 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 BIDP55957 195 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 S100A10P60903 97 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 HYAL1Q12794 435 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 ZSCAN4Q8NAM6 433 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-207ENST00000572253 OR51E1Q8TCB6 317 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 C2orf50Q96LR7 162 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 SEC61A2Q9H9S3 476 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 DNAJB11Q9UBS4 358 aa9.56□□□□□ -0.88
CCDC40-207ENST00000572253 LPAR3Q9UBY5 353 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms