RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 GTF2A1P52655 376 aaPredicted RBP5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 PPP1CBP62140 327 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 BSPH1Q075Z2 132 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 TFF3Q07654 80 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 SNTB2Q13425 540 aaKnown RBP5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 SNTB1Q13884 538 aaKnown RBP5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 CDSNQ15517 529 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 TRAM1Q15629 374 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 YIF1BQ5BJH7 314 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 WDR38Q5JTN6 314 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF684Q5T5D7 378 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 TMEM244Q5VVB8 128 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 XAF1Q6GPH4 301 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 SEZ6L2Q6UXD5 910 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 MEX3BQ6ZN04 569 aaKnown RBP5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 Q6ZS46 218 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 RFPL4BQ6ZWI9 263 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 MYPOPQ86VE0 399 aaPredicted RBP5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 CATSPERDQ86XM0 798 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF584Q8IVC4 421 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 C1orf174Q8IYL3 243 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 FTMTQ8N4E7 242 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR8B12Q8NGG6 310 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR1J1Q8NGS3 322 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR13C3Q8NGS6 347 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR2G2Q8NGZ5 317 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 LINC01560Q8TB33 94 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 FAM222BQ8WU58 562 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 REEP6Q96HR9 211 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 FAM71F1Q96KD3 344 aaPredicted RBP5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 WFIKKN1Q96NZ8 548 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 OPALINQ96PE5 141 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF649Q9BS31 505 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 TMED9Q9BVK6 235 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 BCL2L14Q9BZR8 327 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 EXOSC4Q9NPD3 245 aaKnown RBP5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 NDUFB11Q9NX14 153 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 NPAP1Q9NZP6 1156 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 HHLA2Q9UM44 414 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 DHDHQ9UQ10 334 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 RNF115Q9Y4L5 304 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 PCNX3Q9H6A9 2034 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 A0A0U1RQV5 110 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 LOC100289279A0A1B0GTE1 492 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 A1L4Q6 167 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 GGT3PA6NGU5 568 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 TRIM64CA6NLI5 447 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 VSTM5A8MXK1 200 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF879B4DU55 563 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 E9PI62 339 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 P2RY10O00398 339 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 GOSR1O95249 250 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 LALBAP00709 142 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 HLA-DPB1P04440 258 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 THBDP07204 575 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 COX6B1P14854 86 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 SELEP16581 610 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 CD36P16671 472 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 CPEP16870 476 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 JUNBP17275 347 aaPredicted RBP5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 CD53P19397 219 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 TUBG1P23258 451 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 MYL9P24844 172 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 PCSK6P29122 969 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 GABRA5P31644 462 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 KIR3DL2P43630 455 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 GP2P55259 537 aaKnown RBP5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 SELENOVP59797 346 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 NANOS3P60323 173 aaKnown RBP5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 HGFACQ04756 655 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 SPOCK1Q08629 439 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 GPR50Q13585 617 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 SNAI3Q3KNW1 292 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 GLYATL3Q5SZD4 288 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 SPATA46Q5T0L3 261 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 SYT6Q5T7P8 510 aaPredicted RBP5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 DMKNQ6E0U4 476 aaPredicted RBP5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 RGS7BPQ6MZT1 257 aaPredicted RBP5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 ADAM5Q6NVV9 412 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 FDX2Q6P4F2 183 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 VHLLQ6RSH7 139 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 PGAP1Q75T13 922 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 DOK3Q7L591 496 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 ELMOD2Q8IZ81 293 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 MS4A15Q8N5U1 240 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 CCDC54Q8NEL0 328 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR51E1Q8TCB6 317 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 GPR148Q8TDV2 347 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 GHSRQ92847 366 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 PIK3IP1Q96FE7 263 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 PLPPR2Q96GM1 343 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 PDCD1LG2Q9BQ51 273 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 C1QTNF5Q9BXJ0 243 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 TMPRSS13Q9BYE2 586 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 MRPL18Q9H0U6 180 aaKnown RBP5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 SLITRK2Q9H156 845 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 G6PC2Q9NQR9 355 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 GPR84Q9NQS5 396 aa5.69□□□□□ -1.5
CTDNEP1-204ENST00000570484 TUBG2Q9NRH3 451 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms