RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 ZNF92Q03936 586 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 PRB3Q04118 309 aaPredicted RBP7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 MALLQ13021 153 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR8B8Q15620 311 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 ZNF181Q2M3W8 571 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 KRTAP27-1Q3LI81 207 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 PDLIM3Q53GG5 364 aaPredicted RBP7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 PGM2L1Q6PCE3 622 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 C17orf107Q6ZR85 190 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 CYB561A3Q8NBI2 242 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR51L1Q8NGJ5 315 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 ZNRF4Q8WWF5 429 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 TBX15Q96SF7 602 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 ATF6BQ99941 703 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 FUZQ9BT04 418 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 SLITRK2Q9H156 845 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 FN3KRPQ9HA64 309 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 SMURF1Q9HCE7 757 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 KRCC1Q9NPI7 259 aaPredicted RBP7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 DCAF13Q9NV06 445 aaKnown RBP7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 MRPL22Q9NWU5 206 aaKnown RBP7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 PDP1Q9P0J1 537 aaPredicted RBP7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 RNF7Q9UBF6 113 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 CYB5R1Q9UHQ9 305 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 CENPVL3A0A0U1RRI6 287 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 A0A1B0GWJ7 208 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 hCG_1807616A0A1W2PRN6 198 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 A6NLC8 198 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 M0R135 149 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 LGALS8O00214 317 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 PHYHO14832 338 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 ENSAO43768 121 aaKnown RBP7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 GMNNO75496 209 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 TOX4O94842 621 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 GADD45GO95257 159 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 GYPAP02724 150 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 MELTFP08582 738 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 SLC2A1P11166 492 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 PSKH1P11801 424 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 CFHR2P36980 270 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 CD200P41217 278 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 GATA4P43694 442 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 PRKXP51817 358 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 TPTEP56180 551 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 KRTAP10-3P60369 221 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 ARF6P62330 175 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 ELF3P78545 371 aaPredicted RBP7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 SLC36A3Q495N2 470 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 GLYATL3Q5SZD4 288 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 HACD2Q6Y1H2 254 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 Q6YL49 198 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 FGFRL1Q8N441 504 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 OR4F5Q8NH21 305 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 Q8TCH9 128 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 WFDC12Q8WWY7 111 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 LHX4Q969G2 390 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 ZNF799Q96GE5 643 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 PYURFQ96I23 114 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 DHRS1Q96LJ7 313 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 CCT8L2Q96SF2 557 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 ADAT1Q9BUB4 502 aaKnown RBP7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 EGLN3Q9H6Z9 239 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 C1orf123Q9NWV4 160 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 C1RLQ9NZP8 487 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 ERVK-18Q9QC07 812 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 ABCD2Q9UBJ2 740 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 DNAJB11Q9UBS4 358 aa7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 SAMD4AQ9UPU9 718 aaKnown RBP7.14□□□□□ -1.27
CTDNEP1-203ENST00000570385 A0A1B0GW55 424 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 ZNF879B4DU55 563 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 NDUFAB1O14561 156 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 ARPC3O15145 178 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 FCN3O75636 299 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 IGHV4-59P01825 116 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 SPARCP09486 303 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 DUX4L2P0CJ85 424 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 DUX4L3P0CJ86 424 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 DUX4L4P0CJ87 422 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 DUX4L5P0CJ88 424 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 DUX4L6P0CJ89 424 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 DUX4L7P0CJ90 424 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 ZNF823P16415 610 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 CPT2P23786 658 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 RRM2P31350 389 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 ECH1Q13011 328 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 OLFML2AQ68BL7 652 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 BRICD5Q6PL45 260 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 DUX4L9Q6RFH8 374 aaPredicted RBP7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 ZBTB46Q86UZ6 589 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 CELF2-AS1Q8N7Q2 184 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 PROKR2Q8NFJ6 384 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 OR56B2PQ8NGI1 322 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 OR9Q1Q8NGQ5 310 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 GATAD2BQ8WXI9 593 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 SPTSSAQ969W0 71 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 ERGIC1Q969X5 290 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 SEH1LQ96EE3 360 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 WDFY2Q96P53 400 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 ELAC2Q9BQ52 826 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms