RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 RFPL4BQ6ZWI9 263 aa13.34□□□□□ -0.27
HERPUD1-219ENST00000570273 ANKRD13BQ86YJ7 626 aa13.34□□□□□ -0.27
HERPUD1-219ENST00000570273 OR10AC1Q8NH08 325 aa13.34□□□□□ -0.27
HERPUD1-219ENST00000570273 ABHD4Q8TB40 342 aa13.34□□□□□ -0.27
HERPUD1-219ENST00000570273 TSEN15Q8WW01 171 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-219ENST00000570273 RPL3LQ92901 407 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-219ENST00000570273 APOBEC3DQ96AK3 386 aaPredicted RBP13.34□□□□□ -0.27
HERPUD1-219ENST00000570273 KCNS3Q9BQ31 491 aa13.34□□□□□ -0.27
HERPUD1-219ENST00000570273 OR51B6Q9H340 312 aa13.34□□□□□ -0.27
HERPUD1-219ENST00000570273 NDUFA13Q9P0J0 144 aa13.34□□□□□ -0.27
HERPUD1-219ENST00000570273 SSR3Q9UNL2 185 aa13.34□□□□□ -0.27
HERPUD1-219ENST00000570273 CEPT1Q9Y6K0 416 aa13.34□□□□□ -0.27
HERPUD1-219ENST00000570273 A0A0U1RQV5 110 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 GABRPO00591 440 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 SYT7O43581 403 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 GPX5O75715 221 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 GABARAPO95166 117 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 CRYBB2P43320 205 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 LSM3P62310 102 aaKnown RBP13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 FABP5Q01469 135 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 NAAAQ02083 359 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 GLYATL3Q5SZD4 288 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 COLCA1Q6ZS62 124 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 SLC16A12Q6ZSM3 486 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 ZNF101Q8IZC7 436 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 OR2AE1Q8NHA4 323 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 LINC01560Q8TB33 94 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 GPR148Q8TDV2 347 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 FAM71F1Q96KD3 344 aaPredicted RBP13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 RBM38Q9H0Z9 239 aaKnown RBP13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 NGBQ9NPG2 151 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 GPR84Q9NQS5 396 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 NPDC1Q9NQX5 325 aaPredicted RBP13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 HHLA2Q9UM44 414 aa13.33□□□□□ -0.28
HERPUD1-219ENST00000570273 TRDV1A0A1B0GX56 115 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 A6NHS1 94 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 XRCC2O43543 280 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 SMPD2O60906 423 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 ISG15P05161 165 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 FAM157BP0CG42 384 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 CALCRP30988 508 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 SOX2P48431 317 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 RPS11P62280 158 aaKnown RBP eCLIP13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 MALLQ13021 153 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 INSL4Q14641 139 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 ACSM3Q53FZ2 586 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 TMEM108Q6UXF1 575 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 DOK3Q7L591 496 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 OR51A4Q8NGJ6 313 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 RAB2BQ8WUD1 216 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 ISOC1Q96CN7 298 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 TRMT61AQ96FX7 289 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 REEP6Q96HR9 211 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 OR14A2Q96R54 314 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 RGCCQ9H4X1 137 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 TBCCD1Q9NVR7 557 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 PTTG3PQ9NZH4 202 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 DHDHQ9UQ10 334 aa13.32□□□□□ -0.28
HERPUD1-219ENST00000570273 TRBV5-5A0A0J9YX44 114 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 A0A1B0GTI1 187 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 TUBAL3A6NHL2 446 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 J3QW42 95 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 ATE1O95260 518 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 NGFP01138 241 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 CRYAAP02489 173 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 OCM2P0CE71 109 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 ZNF35P13682 527 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 CCL1P22362 96 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 CD40P25942 277 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 TMBIM6P55061 237 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 Q499Y3 187 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 C22orf42Q6IC83 251 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 CD200R1LQ6Q8B3 271 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 TMEM91Q6ZNR0 172 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 GDPGP1Q6ZNW5 385 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 CEACAM19Q7Z692 300 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 OR5L1Q8NGL2 311 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 OR13C3Q8NGS6 347 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 ZNF420Q8TAQ5 688 aaPredicted RBP13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 AKAP1Q92667 903 aaKnown RBP eCLIP13.31□□□□□ -0.281e-6■□□□□ 9.6
HERPUD1-219ENST00000570273 SGK3Q96BR1 496 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 LYZL4Q96KX0 146 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 FAM192AQ9GZU8 254 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 POFUT1Q9H488 388 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 RSL24D1Q9UHA3 163 aaKnown RBP13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 ZNF391Q9UJN7 358 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 STARD10Q9Y365 291 aa13.31□□□□□ -0.28
HERPUD1-219ENST00000570273 CLEC18AA5D8T8 446 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 ZNF879B4DU55 563 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 ATP6V1G2-DDX39BF2Z307 99 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 ICMTO60725 284 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 IGLV3-1P01715 115 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 GALP22466 123 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 PTAFRP25105 342 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 MAPK3P27361 379 aaPredicted RBP13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 PCSK6P29122 969 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 MAGEB1P43366 347 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 PPP1CBP62140 327 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 ZNF92Q03936 586 aa13.3□□□□□ -0.28
HERPUD1-219ENST00000570273 SPOCK1Q08629 439 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms