RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 VSIG8P0DPA2 414 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 MDH1P40925 334 aaKnown RBP10.22□□□□□ -0.77
SNX29-207ENST00000568949 EMX1Q04741 257 aaPredicted RBP10.22□□□□□ -0.77
SNX29-207ENST00000568949 MALLQ13021 153 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 NFYCQ13952 458 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 MAPRE2Q15555 327 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 PGM2L1Q6PCE3 622 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 C1orf122Q6ZSJ8 110 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 CALHM3Q86XJ0 350 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 FAM90A1Q86YD7 464 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 RNF113BQ8IZP6 322 aaKnown RBP10.22□□□□□ -0.77
SNX29-207ENST00000568949 KLHDC1Q8N7A1 406 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 C11orf44Q8N8P7 122 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 DTX3Q8N9I9 347 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 SPRYD4Q8WW59 207 aaPredicted RBP10.22□□□□□ -0.77
SNX29-207ENST00000568949 ST8SIA4Q92187 359 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 PHF21AQ96BD5 680 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 ZNF570Q96NI8 536 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 NDEL1Q9GZM8 345 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 SYT4Q9H2B2 425 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 RERGLQ9H628 205 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 RANBP3Q9H6Z4 567 aaPredicted RBP10.22□□□□□ -0.77
SNX29-207ENST00000568949 NMNAT1Q9HAN9 279 aaPredicted RBP10.22□□□□□ -0.77
SNX29-207ENST00000568949 ONECUT1Q9UBC0 465 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 SIGLEC9Q9Y336 463 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 LHFPL6Q9Y693 200 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 TENM3Q9P273 2699 aa10.22□□□□□ -0.77
SNX29-207ENST00000568949 ACSM4P0C7M7 580 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 ZNF26P17031 533 aaPredicted RBP10.21□□□□□ -0.77
SNX29-207ENST00000568949 CA6P23280 308 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 PRSS12P56730 875 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 KRR1Q13601 381 aaKnown RBP10.21□□□□□ -0.77
SNX29-207ENST00000568949 TEX36Q5VZQ5 186 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 GPR139Q6DWJ6 353 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 PGAP1Q75T13 922 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 MRPL21Q7Z2W9 205 aaKnown RBP10.21□□□□□ -0.77
SNX29-207ENST00000568949 GCSAMQ8N6F7 178 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 OR4C13Q8NGP0 309 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 OR2T6Q8NHC8 308 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 PPP1R35Q8TAP8 253 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 SLCO4A1Q96BD0 722 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 NSRP1Q9H0G5 558 aaKnown RBP10.21□□□□□ -0.77
SNX29-207ENST00000568949 TOR3AQ9H497 397 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 SIRT7Q9NRC8 400 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 C1orf123Q9NWV4 160 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 VSX1Q9NZR4 365 aaPredicted RBP10.21□□□□□ -0.77
SNX29-207ENST00000568949 RPS6KA6Q9UK32 745 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 AURKCQ9UQB9 309 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 MAB21L2Q9Y586 359 aa10.21□□□□□ -0.77
SNX29-207ENST00000568949 CD300LBA8K4G0 201 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 SLC22A2O15244 555 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 LHBP01229 141 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 SDHAP31040 664 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 SAA4P35542 130 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 MZT1Q08AG7 82 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 ACSM1Q08AH1 577 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 ECH1Q13011 328 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 TRAM2Q15035 370 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 ZBED5Q49AG3 693 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 CYBRD1Q53TN4 286 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 NANOGP8Q6NSW7 305 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 ERICH5Q6P6B1 374 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 TMPRSS11FQ6ZWK6 438 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 ADCK1Q86TW2 530 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 OFCC1Q8IZS5 231 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 BEND2Q8NDZ0 799 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 OR4F17Q8NGA8 305 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 ACOT11Q8WXI4 607 aaPredicted RBP10.2□□□□□ -0.78
SNX29-207ENST00000568949 TNFRSF14Q92956 283 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 OR4F4Q96R69 305 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 SH3GL1Q99961 368 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 ADAT1Q9BUB4 502 aaKnown RBP10.2□□□□□ -0.78
SNX29-207ENST00000568949 NUAK2Q9H093 628 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 FAM234AQ9H0X4 552 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 RAB18Q9NP72 206 aa10.2□□□□□ -0.78
SNX29-207ENST00000568949 DNAH3Q8TD57 4116 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 MEIOCA2RUB1 952 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 A6NLC8 198 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 F5H5K5 113 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 H3BUX3 64 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 CDC42EP2O14613 210 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 CCDC22O60826 627 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 NPPAP01160 153 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 LCATP04180 440 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 MUC1P15941 1255 aaPredicted RBP10.19□□□□□ -0.78
SNX29-207ENST00000568949 UBE2E1P51965 193 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 CYLC2Q14093 348 aaPredicted RBP10.19□□□□□ -0.78
SNX29-207ENST00000568949 FOXB2Q5VYV0 432 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 NCR3LG1Q68D85 454 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 CORO6Q6QEF8 472 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 ZNF826PQ6ZT77 177 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 MBOAT2Q6ZWT7 520 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 SLC36A1Q7Z2H8 476 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 Q8N7P7 452 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 ITPKCQ96DU7 683 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 CLPTM1LQ96KA5 538 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 FNDC11Q9BVV2 318 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 TMEM120AQ9BXJ8 343 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 NRIP3Q9NQ35 241 aa10.19□□□□□ -0.78
SNX29-207ENST00000568949 FGFR1OP2Q9NVK5 253 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms