RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, human

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KARS-208	ENST00000566772	BBS2	Q9BXC9	721 aa		4.38	□□□□□ -1.71
KARS-208	ENST00000566772	TMEM38A	Q9H6F2	299 aa		4.38	□□□□□ -1.71
KARS-208	ENST00000566772	CHMP5	Q9NZZ3	219 aa		4.38	□□□□□ -1.71
KARS-208	ENST00000566772	ZNF229	Q9UJW7	825 aa		4.38	□□□□□ -1.71
KARS-208	ENST00000566772	CACNA1B	Q00975	2339 aa		4.38	□□□□□ -1.71
KARS-208	ENST00000566772	ACACB	O00763	2458 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	PATJ	Q8NI35	1801 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	SLC22A20	A6NK97	555 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772		A8MUA0	341 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	SMKR1	H3BMG3	65 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	AGPAT2	O15120	278 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	SEMG1	P04279	462 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	SLC26A3	P40879	764 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	OR3A4P	P47883	348 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	SERPINB8	P50452	374 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	EGFEM1P	Q0D2K5	195 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	LPAL2	Q16609	132 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	KCTD19	Q17RG1	926 aa	Predicted RBP	4.37	□□□□□ -1.71
KARS-208	ENST00000566772	HSP90B2P	Q58FF3	399 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	PAGE2B	Q5JRK9	111 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	PDPK2P	Q6A1A2	396 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	ADNP2	Q6IQ32	1131 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	TMEM135	Q86UB9	458 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	KIF2B	Q8N4N8	673 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	ZADH2	Q8N4Q0	377 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	MNS1	Q8NEH6	495 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	OR51S1	Q8NGJ8	323 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	TFG	Q92734	400 aa	Predicted RBP	4.37	□□□□□ -1.71
KARS-208	ENST00000566772	FOXC2	Q99958	501 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	VGLL1	Q99990	258 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	C19orf24	Q9BVV8	132 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	KIR3DX1	Q9H7L2	352 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	CSNK1G1	Q9HCP0	422 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	DMAP1	Q9NPF5	467 aa	Predicted RBP	4.37	□□□□□ -1.71
KARS-208	ENST00000566772	CTPS2	Q9NRF8	586 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	APOBEC3B	Q9UH17	382 aa	Known RBP	4.37	□□□□□ -1.71
KARS-208	ENST00000566772	DNAH14	Q0VDD8	3507 aa		4.37	□□□□□ -1.71
KARS-208	ENST00000566772	SPTBN2	O15020	2390 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	USP24	Q9UPU5	2620 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	ARL5C	A6NH57	179 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	LYRM9	A8MSI8	78 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	CENPX	A8MT69	81 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	SRRM5	B3KS81	715 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	RFXANK	O14593	260 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	CCL16	O15467	120 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	XRCC2	O43543	280 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	DPM1	O60762	260 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	FKBP6	O75344	327 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	TDP2	O95551	362 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	FOLR2	P14207	255 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	CMA1	P23946	247 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	FMO3	P31513	532 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	MDH2	P40926	338 aa	Known RBP	4.36	□□□□□ -1.71
KARS-208	ENST00000566772	CSK	P41240	450 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	DLX1	P56177	255 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	TWF1	Q12792	350 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	SYCP1	Q15431	976 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	C18orf21	Q32NC0	220 aa	Predicted RBP	4.36	□□□□□ -1.71
KARS-208	ENST00000566772	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.36	□□□□□ -1.71
KARS-208	ENST00000566772	CGB2	Q6NT52	195 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	ERICH5	Q6P6B1	374 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	ZNF621	Q6ZSS3	439 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	SLC35D2	Q76EJ3	337 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	MOB1B	Q7L9L4	216 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	PID1	Q7Z2X4	250 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	ZNF677	Q86XU0	584 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	OR10H4	Q8NGA5	316 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	OR4D6	Q8NGJ1	314 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	BAALC	Q8WXS3	180 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	ING5	Q8WYH8	240 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	RASL10A	Q92737	203 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	NRBF2	Q96F24	287 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	CPB2	Q96IY4	423 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	CEP170P1	Q96L14	293 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	COL21A1	Q96P44	957 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	MAP1LC3C	Q9BXW4	147 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	OR51J1	Q9H342	316 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	PATZ1	Q9HBE1	687 aa	Known RBP	4.36	□□□□□ -1.71
KARS-208	ENST00000566772	CLN6	Q9NWW5	311 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	RAB23	Q9ULC3	237 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	HES2	Q9Y543	173 aa		4.36	□□□□□ -1.71
KARS-208	ENST00000566772	MAP1B	P46821	2468 aa	Known RBP	4.36	□□□□□ -1.71
KARS-208	ENST00000566772	PHF3	Q92576	2039 aa	Known RBP	4.36	□□□□□ -1.71
KARS-208	ENST00000566772	ANKRD11	Q6UB99	2663 aa	Predicted RBP	4.36	□□□□□ -1.71
KARS-208	ENST00000566772	OTOGL	Q3ZCN5	2332 aa		4.35	□□□□□ -1.71
KARS-208	ENST00000566772	PSMB11	A5LHX3	300 aa		4.35	□□□□□ -1.71
KARS-208	ENST00000566772		H7C0C1	242 aa		4.35	□□□□□ -1.71
KARS-208	ENST00000566772	ZNF780A	O75290	641 aa	Predicted RBP	4.35	□□□□□ -1.71
KARS-208	ENST00000566772	SNAPIN	O95295	136 aa		4.35	□□□□□ -1.71
KARS-208	ENST00000566772	KLK1	P06870	262 aa		4.35	□□□□□ -1.71
KARS-208	ENST00000566772	ZP3	P21754	424 aa		4.35	□□□□□ -1.71
KARS-208	ENST00000566772	LAMTOR4	Q0VGL1	99 aa		4.35	□□□□□ -1.71
KARS-208	ENST00000566772	HTR4	Q13639	388 aa		4.35	□□□□□ -1.71
KARS-208	ENST00000566772	VAMP3	Q15836	100 aa		4.35	□□□□□ -1.71
KARS-208	ENST00000566772	PRR30	Q53SZ7	412 aa	Predicted RBP	4.35	□□□□□ -1.71
KARS-208	ENST00000566772	TPRG1L	Q5T0D9	272 aa		4.35	□□□□□ -1.71
KARS-208	ENST00000566772	FHL5	Q5TD97	284 aa		4.35	□□□□□ -1.71
KARS-208	ENST00000566772	FAAP20	Q6NZ36	180 aa		4.35	□□□□□ -1.71
KARS-208	ENST00000566772	PRMT9	Q6P2P2	845 aa		4.35	□□□□□ -1.71
KARS-208	ENST00000566772	C12orf54	Q6X4T0	127 aa		4.35	□□□□□ -1.71

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