RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 IGHV3OR16-10A0A075B7F0 116 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 TRAV40A0A0B4J280 105 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 LGALS8O00214 317 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 P2RY10O00398 339 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 KRT36O76013 467 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 OTX1P32242 354 aaPredicted RBP12.48□□□□□ -0.41
RNF40-209ENST00000566703 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.48□□□□□ -0.41
RNF40-209ENST00000566703 OR8G1Q15617 311 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 SAMD4BQ5PRF9 694 aaKnown RBP12.48□□□□□ -0.41
RNF40-209ENST00000566703 GPR157Q5UAW9 335 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 DRAM2Q6UX65 266 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 ZNF620Q6ZNG0 422 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 LINC00471Q8N535 108 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 RNF148Q8N7C7 305 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 SDR9C7Q8NEX9 313 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 OR2T4Q8NH00 348 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 ZDHHC16Q969W1 377 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 TMIGD2Q96BF3 282 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 MAP6Q96JE9 813 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 NSMCE2Q96MF7 247 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 CD300AQ9UGN4 299 aa12.48□□□□□ -0.41
RNF40-209ENST00000566703 TRAV38-1A0A0B4J264 116 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 SRRM5B3KS81 715 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 TNFRSF13BO14836 293 aaPredicted RBP12.47□□□□□ -0.41
RNF40-209ENST00000566703 FABP3P05413 133 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 CA6P23280 308 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 RRM2P31350 389 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 FGF12P61328 243 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 MZT1Q08AG7 82 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 MPPED2Q15777 294 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 DEFB112Q30KQ8 113 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 SPATS1Q496A3 300 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 SLC35F1Q5T1Q4 408 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 PRAMEF6Q5VXH4 476 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 PGAM4Q8N0Y7 254 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 TMEM86BQ8N661 226 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 OR4C15Q8NGM1 316 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 FAM71F1Q96KD3 344 aaPredicted RBP12.47□□□□□ -0.41
RNF40-209ENST00000566703 OPA3Q9H6K4 179 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 IL20Q9NYY1 176 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 MRPL15Q9P015 296 aaKnown RBP12.47□□□□□ -0.41
RNF40-209ENST00000566703 KIF17Q9P2E2 1029 aa12.47□□□□□ -0.41
RNF40-209ENST00000566703 SOX21Q9Y651 276 aaPredicted RBP12.47□□□□□ -0.41
RNF40-209ENST00000566703 GGT3PA6NGU5 568 aa12.46□□□□□ -0.41
RNF40-209ENST00000566703 ZNF879B4DU55 563 aa12.46□□□□□ -0.41
RNF40-209ENST00000566703 C22orf46C9J442 243 aa12.46□□□□□ -0.41
RNF40-209ENST00000566703 HOXA3O43365 443 aaPredicted RBP12.46□□□□□ -0.41
RNF40-209ENST00000566703 DDOSTP39656 456 aa12.46□□□□□ -0.41
RNF40-209ENST00000566703 ZNF92Q03936 586 aa12.46□□□□□ -0.41
RNF40-209ENST00000566703 OCLNQ16625 522 aa12.46□□□□□ -0.41
RNF40-209ENST00000566703 TEX30Q5JUR7 227 aa12.46□□□□□ -0.41
RNF40-209ENST00000566703 PGBD2Q6P3X8 592 aa12.46□□□□□ -0.41
RNF40-209ENST00000566703 Q6YL49 198 aa12.46□□□□□ -0.41
RNF40-209ENST00000566703 OR52L1Q8NGH7 329 aa12.46□□□□□ -0.41
RNF40-209ENST00000566703 TRIM15Q9C019 465 aa12.46□□□□□ -0.41
RNF40-209ENST00000566703 FN3KQ9H479 309 aa12.46□□□□□ -0.41
RNF40-209ENST00000566703 UFSP2Q9NUQ7 469 aa12.46□□□□□ -0.41
RNF40-209ENST00000566703 CDH10Q9Y6N8 788 aa12.46□□□□□ -0.41
RNF40-209ENST00000566703 V9GYQ6 96 aa12.46□□□□□ -0.41
RNF40-209ENST00000566703 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.45□□□□□ -0.42
RNF40-209ENST00000566703 BHLHE40O14503 412 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 SNX3O60493 162 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 ECDO95905 644 aaPredicted RBP12.45□□□□□ -0.42
RNF40-209ENST00000566703 CRYBA1P05813 215 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 PYCR1P32322 319 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 CFHR2P36980 270 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 PRSS12P56730 875 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 RPL15P61313 204 aaKnown RBP12.45□□□□□ -0.42
RNF40-209ENST00000566703 PCK2Q16822 640 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 SNAI3Q3KNW1 292 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 TREML4Q6UXN2 200 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 RASSF6Q6ZTQ3 369 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 SPATC1Q76KD6 591 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 ZDHHC21Q8IVQ6 265 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 PNLDC1Q8NA58 520 aaKnown RBP12.45□□□□□ -0.42
RNF40-209ENST00000566703 PROKR2Q8NFJ6 384 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 OR4F5Q8NH21 305 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 TECTBQ96PL2 329 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 CDRT15Q96T59 188 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 KCNJ15Q99712 375 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 ADAT1Q9BUB4 502 aaKnown RBP12.45□□□□□ -0.42
RNF40-209ENST00000566703 C14orf119Q9NWQ9 140 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 POMT1Q9Y6A1 747 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 TENM1Q9UKZ4 2725 aa12.45□□□□□ -0.42
RNF40-209ENST00000566703 MDFIC2A0A1B0GVS7 189 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 OOEPA6NGQ2 149 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 ARPC2O15144 300 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 KCNAB3O43448 404 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 ADAM20O43506 726 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 XRCC2O43543 280 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 LHBP01229 141 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 MMP9P14780 707 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 MDKP21741 143 aaPredicted RBP12.44□□□□□ -0.42
RNF40-209ENST00000566703 FMO3P31513 532 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 BLVRAP53004 296 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 DBPQ10586 325 aaPredicted RBP12.44□□□□□ -0.42
RNF40-209ENST00000566703 PDCD1Q15116 288 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 GLYATL3Q5SZD4 288 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 BRD3OSQ6XYD6 125 aa12.44□□□□□ -0.42
RNF40-209ENST00000566703 CYB561A3Q8NBI2 242 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms