RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 VSX1Q9NZR4 365 aaPredicted RBP13.83□□□□□ -0.2
TSR3-202ENST00000566296 IQCF6A8MYZ5 107 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 G3V2T6 193 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 SOCS2O14508 198 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 RER1O15258 196 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 BAG2O95816 211 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 PLATP00750 562 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 SELEP16581 610 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 ZNF26P17031 533 aaPredicted RBP13.82□□□□□ -0.2
TSR3-202ENST00000566296 OMPP47874 163 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 PITPNBP48739 271 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 CENPAP49450 140 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 RPS6KA3P51812 740 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 ZNF770Q6IQ21 691 aaPredicted RBP13.82□□□□□ -0.2
TSR3-202ENST00000566296 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.82□□□□□ -0.2
TSR3-202ENST00000566296 TMEM179BQ7Z7N9 219 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 JAZF1Q86VZ6 243 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 ZDHHC13Q8IUH4 622 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 BHLHE23Q8NDY6 225 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 GJC3Q8NFK1 279 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 ZDHHC16Q969W1 377 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 GPX7Q96SL4 187 aaPredicted RBP13.82□□□□□ -0.2
TSR3-202ENST00000566296 TMEM246Q9BRR3 403 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 HCAR1Q9BXC0 346 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 SEMA6AQ9H2E6 1030 aa13.82□□□□□ -0.2
TSR3-202ENST00000566296 PDP1Q9P0J1 537 aaPredicted RBP13.82□□□□□ -0.2
TSR3-202ENST00000566296 IGHV3-64DA0A0J9YX35 117 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 FPR3P25089 353 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 CRABP1P29762 137 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 PAX2Q02962 417 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 ZNF404Q494X3 552 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 PGBD2Q6P3X8 592 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 C16orf87Q6PH81 154 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 AQP11Q8NBQ7 271 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 OR9Q2Q8NGE9 314 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 OR11L1Q8NGX0 322 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 GNPDA2Q8TDQ7 276 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 TMIGD2Q96BF3 282 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 SLC30A2Q9BRI3 323 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 NUDT16L1Q9BRJ7 211 aaKnown RBP13.81□□□□□ -0.2
TSR3-202ENST00000566296 OSBPL10Q9BXB5 764 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 NRIP3Q9NQ35 241 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 TMEM100Q9NV29 134 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 CLN8Q9UBY8 286 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 SIGLEC7Q9Y286 467 aa13.81□□□□□ -0.2
TSR3-202ENST00000566296 MDFIC2A0A1B0GVS7 189 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 F5H5P2 479 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 H0YL77 283 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 PHYHO14832 338 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 MLNRO43193 412 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 FSTL3O95633 263 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 ANXA8P13928 327 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 MDKP21741 143 aaPredicted RBP13.8□□□□□ -0.2
TSR3-202ENST00000566296 TSPAN31Q12999 210 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 RIPK1Q13546 671 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 KCNMB1Q16558 191 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 GPR157Q5UAW9 335 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 DCDC5Q6ZRR9 648 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 DNAJC9Q8WXX5 260 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 FEVQ99581 238 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 DGCR6LQ9BY27 220 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 NUAK2Q9H093 628 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 GABARAPL1Q9H0R8 117 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 KIF17Q9P2E2 1029 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 OAZ3Q9UMX2 235 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 IER3IP1Q9Y5U9 82 aa13.8□□□□□ -0.2
TSR3-202ENST00000566296 KIR2DS1A0A191URI9 304 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 A0A1B0GUS0 222 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 IMPA2O14732 288 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 HOXA3O43365 443 aaPredicted RBP13.79□□□□□ -0.2
TSR3-202ENST00000566296 ENSAO43768 121 aaKnown RBP13.79□□□□□ -0.2
TSR3-202ENST00000566296 GASTP01350 101 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 CRYBA1P05813 215 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 GSSP48637 474 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 DEFA6Q01524 100 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 PDLIM3Q53GG5 364 aaPredicted RBP13.79□□□□□ -0.2
TSR3-202ENST00000566296 FAM201AQ5SY85 155 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 DPY19L2P2Q6ZN68 376 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 PTCHD4Q6ZW05 846 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 HS3ST5Q8IZT8 346 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 OR10S1Q8NGN2 331 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 ERGIC1Q969X5 290 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 DACT3Q96B18 629 aaPredicted RBP13.79□□□□□ -0.2
TSR3-202ENST00000566296 WDR76Q9H967 626 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 ZNF556Q9HAH1 456 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 MMP24Q9Y5R2 645 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 SOX21Q9Y651 276 aaPredicted RBP13.79□□□□□ -0.2
TSR3-202ENST00000566296 LHFPL6Q9Y693 200 aa13.79□□□□□ -0.2
TSR3-202ENST00000566296 WNK1Q9H4A3 2382 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 UNC119BA6NIH7 251 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 SAC3D1A6NKF1 404 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 SRRM5B3KS81 715 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 PTP4A3O75365 173 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 TXNDC12O95881 172 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 KNG1P01042 644 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 OMGP23515 440 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 GATA4P43694 442 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 BPIFB3P59826 476 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 HIST1H3AP68431 136 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 COX10Q12887 443 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms