RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 BRD7Q9NPI1 651 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 A3GALT2U3KPV4 340 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 ANKRD17O75179 2603 aaKnown RBP16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 A0A0G2JNJ9 132 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 A0A0U1RQV5 110 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 DVL2O14641 736 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 RAD51DO75771 328 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 LYZL6O75951 148 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 CD2P06729 351 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 ACSM4P0C7M7 580 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 COX6B1P14854 86 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 ZNF12P17014 697 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 CALRP27797 417 aaKnown RBP16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 RPS19P39019 145 aaKnown RBP16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 SLC6A9P48067 706 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 HSD17B12Q53GQ0 312 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 MTFR2Q6P444 385 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 FAM57BQ71RH2 274 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 LUZP2Q86TE4 346 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 CXorf67Q86X51 503 aaPredicted RBP16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 OR8B12Q8NGG6 310 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 TSEN15Q8WW01 171 aaKnown RBP16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 RND1Q92730 232 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 PPP1R14AQ96A00 147 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 OR10A2Q9H208 303 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 MOV10Q9HCE1 1003 aaKnown RBP16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 Q9UFV3 132 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 DHDHQ9UQ10 334 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 MEMO1Q9Y316 297 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 POLQO75417 2590 aa16.6■□□□□ 0.25
CSPG4P13-201ENST00000565545 TRBV5-7A0A0A0MS05 114 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 A0A1B0GVI7 797 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 LOC107986453A0A1B0GWG9 222 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 CASKO14936 926 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 SDC2P34741 201 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 RORCP51449 518 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 ODF4Q2M2E3 257 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 LINC00299Q6ZSB3 139 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 BHLHA15Q7RTS1 189 aaPredicted RBP16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 CROCCP3Q8IVE0 287 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 RDH10Q8IZV5 341 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 ZNF808Q8N4W9 903 aaPredicted RBP16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 CPEB3Q8NE35 698 aaKnown RBP16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 SLC25A46Q96AG3 418 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 CCDC120Q96HB5 630 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 TSC22D3Q99576 134 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 USB1Q9BQ65 265 aaKnown RBP16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 SLC24A3Q9HC58 644 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 NOX4Q9NPH5 578 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 ELOVL5Q9NYP7 299 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 SH3BGRL2Q9UJC5 107 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 ZNF391Q9UJN7 358 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 ITGB1BP2Q9UKP3 347 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 AMDHD2Q9Y303 409 aa16.59■□□□□ 0.25
CSPG4P13-201ENST00000565545 ZNF503-AS2A6NEH8 195 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 A8MXE2 369 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 P2RY10O00398 339 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 SYT7O43581 403 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 SERPINA5P05154 406 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 DBHP09172 617 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 SRMP19623 302 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 PSMB1P20618 241 aaKnown RBP16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 CCL1P22362 96 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 STOMP27105 288 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 ZNF474Q6S9Z5 364 aaPredicted RBP16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 DOK3Q7L591 496 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 ASB5Q8WWX0 329 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 SLC7A6Q92536 515 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 ITFG2Q969R8 447 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 SLITRK2Q9H156 845 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 PPIL3Q9H2H8 161 aaKnown RBP16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 SNTG1Q9NSN8 517 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 MYO7BQ6PIF6 2116 aa16.58■□□□□ 0.24
CSPG4P13-201ENST00000565545 APCP25054 2843 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 PDCD5O14737 125 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 PIN1P1O15428 100 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 IGLV3-1P01715 115 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 SLC2A1P11166 492 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 CBR1P16152 277 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 APLNRP35414 380 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 MDP1Q86V88 176 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 FAM169BQ8N8A8 192 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 OR1J2Q8NGS2 313 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 OR13C3Q8NGS6 347 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 OR10AC1Q8NH08 325 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 TMEM106AQ96A25 262 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 LURAP1Q96LR2 239 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 ZNF75AQ96N20 296 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 KCNS3Q9BQ31 491 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 C1QTNF5Q9BXJ0 243 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 SLIRPQ9GZT3 109 aaKnown RBP16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 NXF2Q9GZY0 626 aaKnown RBP16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 MMP27Q9H306 513 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 RGCCQ9H4X1 137 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 NOX3Q9HBY0 568 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 JKAMPQ9P055 326 aa16.57■□□□□ 0.24
CSPG4P13-201ENST00000565545 A0A1B0GTI1 187 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 TBX1O43435 398 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 TMEM127O75204 238 aa16.56■□□□□ 0.24
CSPG4P13-201ENST00000565545 CLPXO76031 633 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms