RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 AMIGO2Q86SJ2 522 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 ZDHHC13Q8IUH4 622 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 TIGD4Q8IY51 512 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 PARP8Q8N3A8 854 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 TMEM186Q96B77 213 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 DUS3LQ96G46 650 aaKnown RBP15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 MEGF10Q96KG7 1140 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 SP140LQ9H930 580 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 KRT84Q9NSB2 600 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 HIF1ANQ9NWT6 349 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 PCDHB10Q9UN67 800 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 GGT3PA6NGU5 568 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 IFNL4K9M1U5 179 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 MLNRO43193 412 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 IGHV2-5P01817 119 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 APOC1P02654 83 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 HLA-DPB1P04440 258 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 SLC2A1P11166 492 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 CX3CR1P49238 355 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 ZNF92Q03936 586 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 PTGES3Q15185 160 aaKnown RBP15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 GLYATL3Q5SZD4 288 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 RHOUQ7L0Q8 258 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 ZNF771Q7L3S4 317 aaPredicted RBP15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 CXXC5Q7LFL8 322 aaKnown RBP15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 OR2AE1Q8NHA4 323 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 THEM6Q8WUY1 208 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 PRRG3Q9BZD7 231 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 GCM1Q9NP62 436 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 DCAF16Q9NXF7 216 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 UBAP1Q9NZ09 502 aa15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 NOP16Q9Y3C1 178 aaKnown RBP15.49■□□□□ 0.07
SYNGR3-204ENST00000564642 TRAV20A0A0B4J274 112 aa15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 CD300LBA8K4G0 201 aa15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 F5H5P2 479 aa15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 TBX1O43435 398 aa15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 XRCC2O43543 280 aa15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 SELENOFO60613 162 aa15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 IGHV2-70P01814 119 aa15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 ANXA2P07355 339 aaKnown RBP15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 H2BFMP0C1H6 154 aa15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 HNRNPA0Q13151 305 aaKnown RBP15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 ASRGL1Q7L266 308 aa15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 ZNF454Q8N9F8 522 aa15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 BBS1Q8NFJ9 593 aa15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 RNF133Q8WVZ7 376 aa15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 LRTOMTQ8WZ04 291 aa15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 SLC22A4Q9H015 551 aa15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 OPA3Q9H6K4 179 aa15.48■□□□□ 0.07
SYNGR3-204ENST00000564642 LYNP07948 512 aa15.47■□□□□ 0.07
SYNGR3-204ENST00000564642 SRP14P37108 136 aaKnown RBP15.47■□□□□ 0.07
SYNGR3-204ENST00000564642 BTG1P62324 171 aa15.47■□□□□ 0.07
SYNGR3-204ENST00000564642 APOFQ13790 326 aa15.47■□□□□ 0.07
SYNGR3-204ENST00000564642 OR8G1Q15617 311 aa15.47■□□□□ 0.07
SYNGR3-204ENST00000564642 KLHL36Q8N4N3 616 aa15.47■□□□□ 0.07
SYNGR3-204ENST00000564642 SPICQ8N5J4 248 aa15.47■□□□□ 0.07
SYNGR3-204ENST00000564642 OTOSQ8NHW6 89 aa15.47■□□□□ 0.07
SYNGR3-204ENST00000564642 ZNF420Q8TAQ5 688 aaPredicted RBP15.47■□□□□ 0.07
SYNGR3-204ENST00000564642 DNAJC27Q9NZQ0 273 aa15.47■□□□□ 0.07
SYNGR3-204ENST00000564642 ANK3Q12955 4377 aaKnown RBP15.47■□□□□ 0.07
SYNGR3-204ENST00000564642 IGHV3-64DA0A0J9YX35 117 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 A0A1B0GWJ7 208 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 C5orf63A6NC05 138 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 LRRC30A6NM36 301 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 TMEM178BH3BS89 294 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 PLPP2O43688 288 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 MITFO75030 526 aaPredicted RBP15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 SLC2A5P22732 501 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 CA6P23280 308 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 RBMXP38159 391 aaKnown RBP15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 NAA10P41227 235 aaPredicted RBP15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 MMP16P51512 607 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 TIGD6Q17RP2 521 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 FAHD2BQ6P2I3 314 aaPredicted RBP15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 MOGAT3Q86VF5 341 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 LRRC28Q86X40 367 aaPredicted RBP15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 CELF2-AS1Q8N7Q2 184 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 FAHD2AQ96GK7 314 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 CENPNQ96H22 339 aaPredicted RBP15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 SIGLEC11Q96RL6 698 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 AMELYQ99218 206 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 TEAD3Q99594 435 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 SEMA6AQ9H2E6 1030 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 BRD7Q9NPI1 651 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 H2AFY2Q9P0M6 372 aaPredicted RBP15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 ENOPH1Q9UHY7 261 aa15.46■□□□□ 0.07
SYNGR3-204ENST00000564642 GMDSO60547 372 aa15.45■□□□□ 0.06
SYNGR3-204ENST00000564642 IRF2P14316 349 aa15.45■□□□□ 0.06
SYNGR3-204ENST00000564642 ANOS1P23352 680 aa15.45■□□□□ 0.06
SYNGR3-204ENST00000564642 OPRL1P41146 370 aa15.45■□□□□ 0.06
SYNGR3-204ENST00000564642 CD200P41217 278 aa15.45■□□□□ 0.06
SYNGR3-204ENST00000564642 ZNF121P58317 390 aaPredicted RBP15.45■□□□□ 0.06
SYNGR3-204ENST00000564642 TMEM155Q4W5P6 130 aa15.45■□□□□ 0.06
SYNGR3-204ENST00000564642 LCN1P1Q5VSP4 162 aa15.45■□□□□ 0.06
SYNGR3-204ENST00000564642 KDM4DQ6B0I6 523 aa15.45■□□□□ 0.06
SYNGR3-204ENST00000564642 FAM57BQ71RH2 274 aa15.45■□□□□ 0.06
SYNGR3-204ENST00000564642 C1orf87Q8N0U7 546 aa15.45■□□□□ 0.06
SYNGR3-204ENST00000564642 MUC20Q8N307 709 aaPredicted RBP15.45■□□□□ 0.06
SYNGR3-204ENST00000564642 OR52H1Q8NGJ2 320 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms