RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 LINC00523Q86TU6 105 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 CMTM8Q8IZV2 173 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 DAW1Q8N136 415 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 SPANXA2-OT1Q8N9U9 137 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 LRRC75AQ8NAA5 344 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 INO80EQ8NBZ0 244 aaPredicted RBP1.35□□□□□ -2.19
CHD9-211ENST00000564600 OR10AD1Q8NGE0 317 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 SYNPRQ8TBG9 265 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 NEURL3Q96EH8 262 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 RNF145Q96MT1 663 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 NAP1L5Q96NT1 182 aaPredicted RBP1.35□□□□□ -2.19
CHD9-211ENST00000564600 FOXC2Q99958 501 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 MICU1Q9BPX6 476 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 TMEM175Q9BSA9 504 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 RGCCQ9H4X1 137 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 ZNF442Q9H7R0 627 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 WFDC1Q9HC57 220 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 PRSS16Q9NQE7 514 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 MRPL22Q9NWU5 206 aaKnown RBP1.35□□□□□ -2.19
CHD9-211ENST00000564600 RFNGQ9Y644 331 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 ANKRD12Q6UB98 2062 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 IGHV3-72A0A0B4J1Y9 119 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 A0A0B4J2E0 115 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 TMEM223A0PJW6 202 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 OR6C74A6NCV1 312 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 SUPT3HB4E1H0 165 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 CTNSO60931 367 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 REM1O75628 298 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 RCBTB2O95199 551 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 SLC25A14O95258 325 aaPredicted RBP1.34□□□□□ -2.19
CHD9-211ENST00000564600 IFNW1P05000 195 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 KLK1P06870 262 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 IVLP07476 585 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 ADRA2AP08913 450 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 PGA5P0DJD9 388 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 SSTR5P35346 364 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 PCK1P35558 622 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 MYCNOSP40205 109 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 CCT6AP40227 531 aaKnown RBP1.34□□□□□ -2.19
CHD9-211ENST00000564600 ERFP50548 548 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 RPS15AP62244 130 aaKnown RBP1.34□□□□□ -2.19
CHD9-211ENST00000564600 ULK3Q6PHR2 472 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 CEMP1Q6PRD7 247 aaPredicted RBP1.34□□□□□ -2.19
CHD9-211ENST00000564600 MBOAT1Q6ZNC8 495 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 NCCRP1Q6ZVX7 275 aaPredicted RBP1.34□□□□□ -2.19
CHD9-211ENST00000564600 SLC16A13Q7RTY0 426 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 HORMAD1Q86X24 394 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 VKORC1L1Q8N0U8 176 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 OSR2Q8N2R0 312 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 ARRDC1Q8N5I2 433 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 COX18Q8N8Q8 333 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 C19orf18Q8NEA5 215 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 PROKR2Q8NFJ6 384 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 OR10Z1Q8NGY1 313 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 OR6N1Q8NGY5 312 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 ZNF461Q8TAF7 563 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 PIFOQ8TCI5 191 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 APH1BQ8WW43 257 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 PTX4Q96A99 478 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 RBMXL1Q96E39 390 aaKnown RBP1.34□□□□□ -2.19
CHD9-211ENST00000564600 BCL7BQ9BQE9 202 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 OSBPL11Q9BXB4 747 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 C8orf33Q9H7E9 229 aaPredicted RBP1.34□□□□□ -2.19
CHD9-211ENST00000564600 PLEKHF2Q9H8W4 249 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 MRM3Q9HC36 420 aaKnown RBP1.34□□□□□ -2.19
CHD9-211ENST00000564600 EXOSC4Q9NPD3 245 aaKnown RBP1.34□□□□□ -2.19
CHD9-211ENST00000564600 ZNF355PQ9NSJ1 428 aa1.34□□□□□ -2.19
CHD9-211ENST00000564600 MYEF2Q9P2K5 600 aaKnown RBP1.34□□□□□ -2.19
CHD9-211ENST00000564600 YARS2Q9Y2Z4 477 aaKnown RBP1.34□□□□□ -2.19
CHD9-211ENST00000564600 AQRO60306 1485 aaKnown RBP eCLIP1.34□□□□□ -2.19
CHD9-211ENST00000564600 GPATCH8Q9UKJ3 1502 aaKnown RBP1.34□□□□□ -2.2
CHD9-211ENST00000564600 SCN1AP35498 2009 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 TRAV40A0A0B4J280 105 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 IGKV1-8A0A0C4DH67 115 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 IGHV7-4-1A0A0J9YVY3 117 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 C7orf66A4D0T2 115 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 ANKRD65E5RJM6 399 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 H3BN98 237 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 H7C417 338 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 PPP1R2P9O14990 202 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 CHMP2AO43633 222 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 GATCO43716 136 aaKnown RBP1.33□□□□□ -2.2
CHD9-211ENST00000564600 KDELR3O43731 214 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 SPOPO43791 374 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 DNAJB6O75190 326 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 GLSO94925 669 aaPredicted RBP1.33□□□□□ -2.2
CHD9-211ENST00000564600 MPZL1O95297 269 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 FARS2O95363 451 aaKnown RBP1.33□□□□□ -2.2
CHD9-211ENST00000564600 HLA-DQA1P01909 254 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 FABP3P05413 133 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 POLR2MP0CAP2 368 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 PGA4P0DJD7 388 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 PGA3P0DJD8 388 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 MYL9P24844 172 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 IVDP26440 423 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 RDXP35241 583 aaKnown RBP1.33□□□□□ -2.2
CHD9-211ENST00000564600 CEACAM3P40198 252 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 RFC3P40938 356 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 PPICP45877 212 aa1.33□□□□□ -2.2
CHD9-211ENST00000564600 CXCL12P48061 93 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms