RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	C9orf131	Q5VYM1	1079 aa		3.87	□□□□□ -1.79
MACF1-231	ENST00000564288	WBP2NL	Q6ICG8	309 aa		3.87	□□□□□ -1.79
MACF1-231	ENST00000564288	IL20RB	Q6UXL0	311 aa		3.87	□□□□□ -1.79
MACF1-231	ENST00000564288	MRGPRX3	Q96LB0	322 aa		3.87	□□□□□ -1.79
MACF1-231	ENST00000564288	ADH1B	P00325	375 aa		3.87	□□□□□ -1.79
MACF1-231	ENST00000564288	DCTD	P32321	178 aa		3.87	□□□□□ -1.79
MACF1-231	ENST00000564288	SLC6A11	P48066	632 aa		3.87	□□□□□ -1.79
MACF1-231	ENST00000564288	IL13RA2	Q14627	380 aa		3.87	□□□□□ -1.79
MACF1-231	ENST00000564288	VAX1	Q5SQQ9	334 aa		3.87	□□□□□ -1.79
MACF1-231	ENST00000564288	P2RY12	Q9H244	342 aa		3.87	□□□□□ -1.79
MACF1-231	ENST00000564288	hCG_1809904	A0A1W2PP81	198 aa		3.87	□□□□□ -1.79
MACF1-231	ENST00000564288		A0A1W2PR64	198 aa		3.87	□□□□□ -1.79
MACF1-231	ENST00000564288		A0A1W2PRV1	198 aa		3.87	□□□□□ -1.79
MACF1-231	ENST00000564288	SLC25A43	Q8WUT9	341 aa	Predicted RBP	3.87	□□□□□ -1.79
MACF1-231	ENST00000564288	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288		A0A1W2PN81	502 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288		J3KTA2	159 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF28	P17035	718 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CHRNA7	P36544	502 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	OR51Q1	Q8NH59	317 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	R3HDM4	Q96D70	268 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	OR1F2P	Q96R84	312 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	P2RX4	Q99571	388 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	GSX1	Q9H4S2	264 aa	Predicted RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ISG20L2	Q9H9L3	353 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ANKRD39	Q53RE8	183 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	OR2I1P	Q8NGU4	316 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	3.86	□□□□□ -1.79	7e-7	■■■■□ 22.5
MACF1-231	ENST00000564288	WNT10B	O00744	389 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CSTA	P01040	98 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CTSH	P09668	335 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	RD3L	P0DJH9	198 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SLC35A1	P78382	337 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	MSRB3	Q8IXL7	192 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CCDC74A	Q96AQ1	378 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CAPN10	Q9HC96	672 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	TXNDC12	O95881	172 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	MDH2	P40926	338 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	DGKE	P52429	567 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	RPS24	P62847	133 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	NEIL2	Q969S2	332 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	TMEM208	Q9BTX3	173 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	RNF126	Q9BV68	326 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	GNG13	Q9P2W3	67 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	OR5V1	Q9UGF6	321 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	NAGK	Q9UJ70	344 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288		A6NLC8	198 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CD74	P04233	296 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CD99	P14209	185 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ZBTB25	P24278	435 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CTH	P32929	405 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	TSPAN7	P41732	249 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	GALR1	P47211	349 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	EBP	Q15125	230 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	C10orf91	Q5T1B1	145 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	KIAA0895L	Q68EN5	471 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF770	Q6IQ21	691 aa	Predicted RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	OR9A2	Q8NGT5	310 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	KLRG1	Q96E93	195 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	DAZAP1	Q96EP5	407 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	C5orf34	Q96MH7	638 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SRD5A3	Q9H8P0	318 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SF3B6	Q9Y3B4	125 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	AK4	P27144	223 aa	Predicted RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CLEC18B	Q6UXF7	455 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	AVPR2	P30518	371 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CASP6	P55212	293 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ATP5I	P56385	69 aa	Predicted RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SLC9A3R2	Q15599	337 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	DMRT3	Q9NQL9	472 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	LOC102723971	A0A1B0GUV8	181 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ACKR3	P25106	362 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	HOXA6	P31267	233 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	AKR1C3	P42330	323 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ODF4	Q2M2E3	257 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SCD5	Q86SK9	330 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	MRGPRE	Q86SM8	312 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	NECAP2	Q9NVZ3	263 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SLC7A7	Q9UM01	511 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	GPR75	O95800	540 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ATP1B3	P54709	279 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SUMO3	P55854	103 aa	Predicted RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	LYRM7	Q5U5X0	104 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	TRAPPC6B	Q86SZ2	158 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	TRMT61A	Q96FX7	289 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CCDC74B	Q96LY2	380 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	NEU1	Q99519	415 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CASTOR2	A6NHX0	329 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288		M0QZQ0	153 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	GEMIN2	O14893	280 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	GPANK1	O95872	356 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	HLA-DOB	P13765	273 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	BRS3	P32247	399 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	HNRNPK	P61978	463 aa	Known RBP eCLIP	3.86	□□□□□ -1.79	9e-10	■■■□□ 19.1
MACF1-231	ENST00000564288	GPR18	Q14330	331 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	MEP1B	Q16820	701 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF805	Q5CZA5	627 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	TMEM225	Q6GV28	225 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	C1orf174	Q8IYL3	243 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	C11orf42	Q8N5U0	333 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms