RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 CDRT1O95170 752 aa15.7■□□□□ 0.1
GDE1-203ENST00000564172 POU3F2P20265 443 aaPredicted RBP15.7■□□□□ 0.1
GDE1-203ENST00000564172 SUCLG1P53597 346 aaKnown RBP15.7■□□□□ 0.1
GDE1-203ENST00000564172 RAC3P60763 192 aa15.7■□□□□ 0.1
GDE1-203ENST00000564172 ACTC1P68032 377 aa15.7■□□□□ 0.1
GDE1-203ENST00000564172 ACTA1P68133 377 aa15.7■□□□□ 0.1
GDE1-203ENST00000564172 SMCO1Q147U7 214 aa15.7■□□□□ 0.1
GDE1-203ENST00000564172 ESPNLQ6ZVH7 1005 aa15.7■□□□□ 0.1
GDE1-203ENST00000564172 SYT14Q8NB59 555 aa15.7■□□□□ 0.1
GDE1-203ENST00000564172 C2CD4CQ8TF44 421 aa15.7■□□□□ 0.1
GDE1-203ENST00000564172 KCNK17Q96T54 332 aa15.7■□□□□ 0.1
GDE1-203ENST00000564172 VRK1Q99986 396 aaPredicted RBP15.7■□□□□ 0.1
GDE1-203ENST00000564172 RASD1Q9Y272 281 aa15.7■□□□□ 0.1
GDE1-203ENST00000564172 TEX46H3BTG2 121 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 SLC16A7O60669 478 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 IFNA10P01566 189 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 OR2T7P0C7T2 308 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 ZNF43P17038 809 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 BIDP55957 195 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 CLDN15P56746 228 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 PPIAP62937 165 aaKnown RBP15.69■□□□□ 0.1
GDE1-203ENST00000564172 ZNF85Q03923 595 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 HNRNPA0Q13151 305 aaKnown RBP15.69■□□□□ 0.1
GDE1-203ENST00000564172 GK2Q14410 553 aaPredicted RBP15.69■□□□□ 0.1
GDE1-203ENST00000564172 C9orf152Q5JTZ5 239 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 CNIH2Q6PI25 160 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 ZNF322Q6U7Q0 402 aaPredicted RBP15.69■□□□□ 0.1
GDE1-203ENST00000564172 LDLRAD3Q86YD5 345 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 OR2T27Q8NH04 317 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 SPRYD4Q8WW59 207 aaPredicted RBP15.69■□□□□ 0.1
GDE1-203ENST00000564172 ADGRG7Q96K78 797 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 UCN2Q96RP3 112 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 NAA11Q9BSU3 229 aaPredicted RBP15.69■□□□□ 0.1
GDE1-203ENST00000564172 SRXN1Q9BYN0 137 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 ISG20L2Q9H9L3 353 aaKnown RBP15.69■□□□□ 0.1
GDE1-203ENST00000564172 NDUFB11Q9NX14 153 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 SSUH2Q9Y2M2 353 aa15.69■□□□□ 0.1
GDE1-203ENST00000564172 IGHV3-15A0A0B4J1V0 119 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 DNPH1O43598 174 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 RGS11O94810 467 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 APC2O95996 2303 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 CTLA4P16410 223 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 CASP6P55212 293 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 CARD18P57730 90 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 AARDQ4LEZ3 155 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 ZNF57Q68EA5 555 aaPredicted RBP15.68■□□□□ 0.1
GDE1-203ENST00000564172 HBMQ6B0K9 141 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 SLC35F2Q8IXU6 374 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 SMAD5Q99717 465 aaKnown RBP15.68■□□□□ 0.1
GDE1-203ENST00000564172 OCSTAMPQ9BR26 566 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 TSPAN10Q9H1Z9 355 aaPredicted RBP15.68■□□□□ 0.1
GDE1-203ENST00000564172 ISYNA1Q9NPH2 558 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 IGLV1-36A0A0B4J1U3 117 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 TCAPO15273 167 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 VAMP5O95183 116 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 SEZ6L2Q6UXD5 910 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 SSX6Q7RTT6 188 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 KLBQ86Z14 1044 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 OR2V1Q8NHB1 315 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 DPAGT1Q9H3H5 408 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 KLHL13Q9P2N7 655 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 ZMIZ1Q9ULJ6 1067 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 PLEKHA6Q9Y2H5 1048 aa15.68■□□□□ 0.1
GDE1-203ENST00000564172 MEX3AA1L020 520 aaKnown RBP15.67■□□□□ 0.1
GDE1-203ENST00000564172 RP2O75695 350 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 CRTAPO75718 401 aaPredicted RBP15.67■□□□□ 0.1
GDE1-203ENST00000564172 GPANK1O95872 356 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 CRABP1P29762 137 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 RBP2P50120 134 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 LIPKQ5VXJ0 399 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 ASB18Q6ZVZ8 466 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 RFLNBQ8N5W9 214 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 KDF1Q8NAX2 398 aaPredicted RBP15.67■□□□□ 0.1
GDE1-203ENST00000564172 OR10D3Q8NH80 312 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 TCTEX1D2Q8WW35 142 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 ORAI1Q96D31 301 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 MS4A3Q96HJ5 214 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 MRPL13Q9BYD1 178 aaKnown RBP15.67■□□□□ 0.1
GDE1-203ENST00000564172 TVP23AA6NH52 213 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 DISC1C4P0D8 188 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 CXCL13O43927 109 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 SLC34A2O95436 690 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 GABRA1P14867 456 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 CPEP16870 476 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 EIF1AXP47813 144 aaKnown RBP15.67■□□□□ 0.1
GDE1-203ENST00000564172 ACSM1Q08AH1 577 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 IL18Q14116 193 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 SLC10A1Q14973 349 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 SLC16A9Q7RTY1 509 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 TSNAXQ99598 290 aaKnown RBP15.67■□□□□ 0.1
GDE1-203ENST00000564172 TMPRSS5Q9H3S3 457 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 ACKR4Q9NPB9 350 aa15.67■□□□□ 0.1
GDE1-203ENST00000564172 SMAD9O15198 467 aaKnown RBP15.66■□□□□ 0.1
GDE1-203ENST00000564172 AQP8O94778 261 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 PPP3CBP16298 524 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 CXCL2P19875 107 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 NFYAP23511 347 aaPredicted RBP15.66■□□□□ 0.1
GDE1-203ENST00000564172 PAX6P26367 422 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 LHX2P50458 406 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 FMODQ06828 376 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms