RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 CX3CR1P49238 355 aa16.79■□□□□ 0.28
CMTM3-207ENST00000564060 LMO4P61968 165 aa16.79■□□□□ 0.28
CMTM3-207ENST00000564060 PTGES3Q15185 160 aaKnown RBP16.79■□□□□ 0.28
CMTM3-207ENST00000564060 CR1LQ2VPA4 569 aa16.79■□□□□ 0.28
CMTM3-207ENST00000564060 SNAI3Q3KNW1 292 aa16.79■□□□□ 0.28
CMTM3-207ENST00000564060 TMEM236Q5W0B7 351 aa16.79■□□□□ 0.28
CMTM3-207ENST00000564060 OTOSQ8NHW6 89 aa16.79■□□□□ 0.28
CMTM3-207ENST00000564060 MEGF10Q96KG7 1140 aa16.79■□□□□ 0.28
CMTM3-207ENST00000564060 OSBPL10Q9BXB5 764 aa16.79■□□□□ 0.28
CMTM3-207ENST00000564060 TMEFF2Q9UIK5 374 aaPredicted RBP16.79■□□□□ 0.28
CMTM3-207ENST00000564060 JMJD1CQ15652 2540 aa16.79■□□□□ 0.28
CMTM3-207ENST00000564060 TRAV20A0A0B4J274 112 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 A0A1B0GWJ7 208 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 GGT3PA6NGU5 568 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 EBAG9O00559 213 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 IGHV2-5P01817 119 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 ANXA2P07355 339 aaKnown RBP16.78■□□□□ 0.28
CMTM3-207ENST00000564060 H2BFMP0C1H6 154 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 SRD5A1P18405 259 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 SPRNQ5BIV9 151 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 KDM4DQ6B0I6 523 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 SPATC1Q76KD6 591 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 AMIGO2Q86SJ2 522 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.78■□□□□ 0.28
CMTM3-207ENST00000564060 C10orf67Q8IYJ2 551 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 SPICQ8N5J4 248 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 CELF2-AS1Q8N7Q2 184 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 OR52H1Q8NGJ2 320 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 LRTOMTQ8WZ04 291 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 TMEM186Q96B77 213 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 CENPNQ96H22 339 aaPredicted RBP16.78■□□□□ 0.28
CMTM3-207ENST00000564060 REPIN1Q9BWE0 567 aaKnown RBP16.78■□□□□ 0.28
CMTM3-207ENST00000564060 GCM1Q9NP62 436 aa16.78■□□□□ 0.28
CMTM3-207ENST00000564060 LRRC30A6NM36 301 aa16.77■□□□□ 0.28
CMTM3-207ENST00000564060 CD300LBA8K4G0 201 aa16.77■□□□□ 0.28
CMTM3-207ENST00000564060 FAM157AC9JC47 383 aa16.77■□□□□ 0.28
CMTM3-207ENST00000564060 MLNRO43193 412 aa16.77■□□□□ 0.28
CMTM3-207ENST00000564060 SELENOFO60613 162 aa16.77■□□□□ 0.28
CMTM3-207ENST00000564060 SLC2A5P22732 501 aa16.77■□□□□ 0.28
CMTM3-207ENST00000564060 CFL1P23528 166 aaKnown RBP16.77■□□□□ 0.28
CMTM3-207ENST00000564060 DDOSTP39656 456 aa16.77■□□□□ 0.28
CMTM3-207ENST00000564060 ZNF92Q03936 586 aa16.77■□□□□ 0.28
CMTM3-207ENST00000564060 APOFQ13790 326 aa16.77■□□□□ 0.28
CMTM3-207ENST00000564060 GLYATL3Q5SZD4 288 aa16.77■□□□□ 0.28
CMTM3-207ENST00000564060 C1orf87Q8N0U7 546 aa16.77■□□□□ 0.28
CMTM3-207ENST00000564060 KLHL36Q8N4N3 616 aa16.77■□□□□ 0.28
CMTM3-207ENST00000564060 THEM6Q8WUY1 208 aa16.77■□□□□ 0.28
CMTM3-207ENST00000564060 ERGIC1Q969X5 290 aa16.77■□□□□ 0.28
CMTM3-207ENST00000564060 NIPAL2Q9H841 368 aa16.77■□□□□ 0.28
CMTM3-207ENST00000564060 TBX1O43435 398 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 IGHV2-70P01814 119 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 SLC2A1P11166 492 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 OPRL1P41146 370 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 GATA4P43694 442 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 MMP16P51512 607 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 ACTR3P61158 418 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 BTG1P62324 171 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 MZT1Q08AG7 82 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 TIGD6Q17RP2 521 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 ZNF181Q2M3W8 571 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 TMEM155Q4W5P6 130 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 ZFP1Q6P2D0 407 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 SLC16A9Q7RTY1 509 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 MUC20Q8N307 709 aaPredicted RBP16.76■□□□□ 0.27
CMTM3-207ENST00000564060 TEX29Q8N6K0 151 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 OR2AE1Q8NHA4 323 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 YIPF3Q9GZM5 350 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 HIF1ANQ9NWT6 349 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 MRPL15Q9P015 296 aaKnown RBP16.76■□□□□ 0.27
CMTM3-207ENST00000564060 H2AFY2Q9P0M6 372 aaPredicted RBP16.76■□□□□ 0.27
CMTM3-207ENST00000564060 LAMP5Q9UJQ1 280 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 PCDHB10Q9UN67 800 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 N6AMT1Q9Y5N5 214 aa16.76■□□□□ 0.27
CMTM3-207ENST00000564060 ZAR1LA6NP61 321 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 F5H5P2 479 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 H0YL77 283 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 GMDSO60547 372 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 IRF2P14316 349 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 CD200P41217 278 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 NAA10P41227 235 aaPredicted RBP16.75■□□□□ 0.27
CMTM3-207ENST00000564060 OR8G1Q15617 311 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 SNCBQ16143 134 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 SLX4IPQ5VYV7 408 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 KCTD18Q6PI47 426 aaPredicted RBP16.75■□□□□ 0.27
CMTM3-207ENST00000564060 KLBQ86Z14 1044 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 SPERTQ8NA61 448 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 BBS1Q8NFJ9 593 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 SPSB4Q96A44 273 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 SIGLEC11Q96RL6 698 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 ADAT1Q9BUB4 502 aaKnown RBP16.75■□□□□ 0.27
CMTM3-207ENST00000564060 OR10A2Q9H208 303 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 SEMA6AQ9H2E6 1030 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 RGCCQ9H4X1 137 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 LPAR2Q9HBW0 351 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 UBAP1Q9NZ09 502 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 OAZ3Q9UMX2 235 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 TMEM14AQ9Y6G1 99 aa16.75■□□□□ 0.27
CMTM3-207ENST00000564060 DOCK11Q5JSL3 2073 aa16.74■□□□□ 0.27
CMTM3-207ENST00000564060 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.74■□□□□ 0.27
CMTM3-207ENST00000564060 SLC22A31A6NKX4 558 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms