RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 SHFQ7M4L6 423 aa25.95■■□□□ 1.74
CMTM4-204ENST00000563952 TIGD4Q8IY51 512 aa25.95■■□□□ 1.74
CMTM4-204ENST00000563952 BBS1Q8NFJ9 593 aa25.95■■□□□ 1.74
CMTM4-204ENST00000563952 TVP23BQ9NYZ1 205 aa25.95■■□□□ 1.74
CMTM4-204ENST00000563952 G3V2T6 193 aa25.94■■□□□ 1.74
CMTM4-204ENST00000563952 SELENOFO60613 162 aa25.94■■□□□ 1.74
CMTM4-204ENST00000563952 ANPEPP15144 967 aa25.94■■□□□ 1.74
CMTM4-204ENST00000563952 PCMT1P22061 227 aa25.94■■□□□ 1.74
CMTM4-204ENST00000563952 HSD11B1P28845 292 aa25.94■■□□□ 1.74
CMTM4-204ENST00000563952 SNAPC1Q16533 368 aa25.94■■□□□ 1.74
CMTM4-204ENST00000563952 AMIGO2Q86SJ2 522 aa25.94■■□□□ 1.74
CMTM4-204ENST00000563952 GCM1Q9NP62 436 aa25.94■■□□□ 1.74
CMTM4-204ENST00000563952 PRODHO43272 600 aa25.93■■□□□ 1.74
CMTM4-204ENST00000563952 IGHV2-70P01814 119 aa25.93■■□□□ 1.74
CMTM4-204ENST00000563952 CX3CR1P49238 355 aa25.93■■□□□ 1.74
CMTM4-204ENST00000563952 MMP16P51512 607 aa25.93■■□□□ 1.74
CMTM4-204ENST00000563952 CXXC5Q7LFL8 322 aaKnown RBP25.93■■□□□ 1.74
CMTM4-204ENST00000563952 RNF133Q8WVZ7 376 aa25.93■■□□□ 1.74
CMTM4-204ENST00000563952 AMELYQ99218 206 aa25.93■■□□□ 1.74
CMTM4-204ENST00000563952 MDFIQ99750 246 aa25.93■■□□□ 1.74
CMTM4-204ENST00000563952 KRT84Q9NSB2 600 aa25.93■■□□□ 1.74
CMTM4-204ENST00000563952 DNHD1Q96M86 4753 aa25.93■■□□□ 1.74
CMTM4-204ENST00000563952 GGT3PA6NGU5 568 aa25.92■■□□□ 1.74
CMTM4-204ENST00000563952 CD300LBA8K4G0 201 aa25.92■■□□□ 1.74
CMTM4-204ENST00000563952 TBX1O43435 398 aa25.92■■□□□ 1.74
CMTM4-204ENST00000563952 MITFO75030 526 aaPredicted RBP25.92■■□□□ 1.74
CMTM4-204ENST00000563952 ANXA2P07355 339 aaKnown RBP25.92■■□□□ 1.74
CMTM4-204ENST00000563952 PARP8Q8N3A8 854 aa25.92■■□□□ 1.74
CMTM4-204ENST00000563952 ZNF420Q8TAQ5 688 aaPredicted RBP25.92■■□□□ 1.74
CMTM4-204ENST00000563952 LRTOMTQ8WZ04 291 aa25.92■■□□□ 1.74
CMTM4-204ENST00000563952 DUS3LQ96G46 650 aaKnown RBP25.92■■□□□ 1.74
CMTM4-204ENST00000563952 DNAJC27Q9NZQ0 273 aa25.92■■□□□ 1.74
CMTM4-204ENST00000563952 TRAV20A0A0B4J274 112 aa25.91■■□□□ 1.74
CMTM4-204ENST00000563952 PLPP2O43688 288 aa25.91■■□□□ 1.74
CMTM4-204ENST00000563952 FCGR1AP12314 374 aa25.91■■□□□ 1.74
CMTM4-204ENST00000563952 SRP14P37108 136 aaKnown RBP25.91■■□□□ 1.74
CMTM4-204ENST00000563952 NAA10P41227 235 aaPredicted RBP25.91■■□□□ 1.74
CMTM4-204ENST00000563952 PTGES3Q15185 160 aaKnown RBP25.91■■□□□ 1.74
CMTM4-204ENST00000563952 MOGAT3Q86VF5 341 aa25.91■■□□□ 1.74
CMTM4-204ENST00000563952 THEM6Q8WUY1 208 aa25.91■■□□□ 1.74
CMTM4-204ENST00000563952 SIGLEC11Q96RL6 698 aa25.91■■□□□ 1.74
CMTM4-204ENST00000563952 REPIN1Q9BWE0 567 aaKnown RBP25.91■■□□□ 1.74
CMTM4-204ENST00000563952 TOR3AQ9H497 397 aa25.91■■□□□ 1.74
CMTM4-204ENST00000563952 PCDHB10Q9UN67 800 aa25.91■■□□□ 1.74
CMTM4-204ENST00000563952 CA6P23280 308 aa25.9■■□□□ 1.74
CMTM4-204ENST00000563952 BTG1P62324 171 aa25.9■■□□□ 1.74
CMTM4-204ENST00000563952 APOFQ13790 326 aa25.9■■□□□ 1.74
CMTM4-204ENST00000563952 SLC35D3Q5M8T2 416 aa25.9■■□□□ 1.74
CMTM4-204ENST00000563952 CCDC121Q6ZUS5 278 aa25.9■■□□□ 1.74
CMTM4-204ENST00000563952 ASRGL1Q7L266 308 aa25.9■■□□□ 1.74
CMTM4-204ENST00000563952 ZDHHC13Q8IUH4 622 aa25.9■■□□□ 1.74
CMTM4-204ENST00000563952 A0A1B0GWJ7 208 aa25.89■■□□□ 1.74
CMTM4-204ENST00000563952 TMEM178BH3BS89 294 aa25.89■■□□□ 1.74
CMTM4-204ENST00000563952 LYNP07948 512 aa25.89■■□□□ 1.74
CMTM4-204ENST00000563952 H2BFMP0C1H6 154 aa25.89■■□□□ 1.74
CMTM4-204ENST00000563952 SLC2A5P22732 501 aa25.89■■□□□ 1.74
CMTM4-204ENST00000563952 OPRL1P41146 370 aa25.89■■□□□ 1.74
CMTM4-204ENST00000563952 RAD23AP54725 363 aa25.89■■□□□ 1.74
CMTM4-204ENST00000563952 ESRRGP62508 458 aa25.89■■□□□ 1.74
CMTM4-204ENST00000563952 ZMYND11Q15326 602 aa25.89■■□□□ 1.74
CMTM4-204ENST00000563952 OR8G1Q15617 311 aa25.89■■□□□ 1.74
CMTM4-204ENST00000563952 FAHD2BQ6P2I3 314 aaPredicted RBP25.89■■□□□ 1.74
CMTM4-204ENST00000563952 OTOSQ8NHW6 89 aa25.89■■□□□ 1.74
CMTM4-204ENST00000563952 FAHD2AQ96GK7 314 aa25.89■■□□□ 1.74
CMTM4-204ENST00000563952 SEMA6AQ9H2E6 1030 aa25.89■■□□□ 1.74
CMTM4-204ENST00000563952 BRD7Q9NPI1 651 aa25.89■■□□□ 1.74
CMTM4-204ENST00000563952 IFNL4K9M1U5 179 aa25.88■■□□□ 1.73
CMTM4-204ENST00000563952 XRCC2O43543 280 aa25.88■■□□□ 1.73
CMTM4-204ENST00000563952 CYB5R3P00387 301 aaPredicted RBP25.88■■□□□ 1.73
CMTM4-204ENST00000563952 FAM57BQ71RH2 274 aa25.88■■□□□ 1.73
CMTM4-204ENST00000563952 HIST2H2ABQ8IUE6 130 aaPredicted RBP25.88■■□□□ 1.73
CMTM4-204ENST00000563952 KLHL36Q8N4N3 616 aa25.88■■□□□ 1.73
CMTM4-204ENST00000563952 SPICQ8N5J4 248 aa25.88■■□□□ 1.73
CMTM4-204ENST00000563952 ZNF454Q8N9F8 522 aa25.88■■□□□ 1.73
CMTM4-204ENST00000563952 GABARAPL1Q9H0R8 117 aa25.88■■□□□ 1.73
CMTM4-204ENST00000563952 APOC1P02654 83 aa25.87■■□□□ 1.73
CMTM4-204ENST00000563952 ZNF121P58317 390 aaPredicted RBP25.87■■□□□ 1.73
CMTM4-204ENST00000563952 MAB21L1Q13394 359 aa25.87■■□□□ 1.73
CMTM4-204ENST00000563952 TIGD6Q17RP2 521 aa25.87■■□□□ 1.73
CMTM4-204ENST00000563952 LRRC28Q86X40 367 aaPredicted RBP25.87■■□□□ 1.73
CMTM4-204ENST00000563952 OR56B2PQ8NGI1 322 aa25.87■■□□□ 1.73
CMTM4-204ENST00000563952 ADAT1Q9BUB4 502 aaKnown RBP25.87■■□□□ 1.73
CMTM4-204ENST00000563952 PRRG3Q9BZD7 231 aa25.87■■□□□ 1.73
CMTM4-204ENST00000563952 OPA3Q9H6K4 179 aa25.87■■□□□ 1.73
CMTM4-204ENST00000563952 SP140LQ9H930 580 aa25.87■■□□□ 1.73
CMTM4-204ENST00000563952 KLHDC2Q9Y2U9 406 aa25.87■■□□□ 1.73
CMTM4-204ENST00000563952 M0R129 80 aa25.86■■□□□ 1.73
CMTM4-204ENST00000563952 PRKYO43930 277 aa25.86■■□□□ 1.73
CMTM4-204ENST00000563952 ZNF205O95201 554 aa25.86■■□□□ 1.73
CMTM4-204ENST00000563952 LCN2P80188 198 aa25.86■■□□□ 1.73
CMTM4-204ENST00000563952 TMEM155Q4W5P6 130 aa25.86■■□□□ 1.73
CMTM4-204ENST00000563952 KDM4DQ6B0I6 523 aa25.86■■□□□ 1.73
CMTM4-204ENST00000563952 RHOUQ7L0Q8 258 aa25.86■■□□□ 1.73
CMTM4-204ENST00000563952 DVL3Q92997 716 aaPredicted RBP25.86■■□□□ 1.73
CMTM4-204ENST00000563952 SLC22A4Q9H015 551 aa25.86■■□□□ 1.73
CMTM4-204ENST00000563952 NOP16Q9Y3C1 178 aaKnown RBP25.86■■□□□ 1.73
CMTM4-204ENST00000563952 CUBNO60494 3623 aa25.86■■□□□ 1.73
CMTM4-204ENST00000563952 LRRC30A6NM36 301 aa25.85■■□□□ 1.73
CMTM4-204ENST00000563952 PNPP00491 289 aa25.85■■□□□ 1.73
CMTM4-204ENST00000563952 MRPL3P09001 348 aaKnown RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms