RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 WDR88Q6ZMY6 472 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 CELF2-AS1Q8N7Q2 184 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 OR11H1Q8NG94 326 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 STK35Q8TDR2 534 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 MALSU1Q96EH3 234 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 APOPT1Q96IL0 206 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 C20orf27Q9GZN8 174 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 FN3KQ9H479 309 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 AKTIPQ9H8T0 292 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 MARCOQ9UEW3 520 aaPredicted RBP8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 A0A1B0GWJ7 208 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 MAGEA13PA6NCF6 341 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 SH2D7A6NKC9 451 aaPredicted RBP8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 ITM2AO43736 263 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 CPSF4O95639 269 aaKnown RBP8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 RPLP1P05386 114 aaKnown RBP8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 DBIP07108 87 aaKnown RBP8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 HLA-DOBP13765 273 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 SERPINB5P36952 375 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 CSNK1A1P48729 337 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 RAD23AP54725 363 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 SSX2Q16385 188 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 SOHLH1Q5JUK2 328 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 RNF220Q5VTB9 566 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 NXNQ6DKJ4 435 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 WBP2NLQ6ICG8 309 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 SERPINA11Q86U17 422 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 ZNF440Q8IYI8 595 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 OR5AS1Q8N127 324 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 LYPD1Q8N2G4 141 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 BOLLQ8N9W6 283 aaKnown RBP8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 C4orf3Q8WVX3 66 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 TMEM106AQ96A25 262 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 SLC41A3Q96GZ6 507 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 C4orf45Q96LM5 186 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 C16orf45Q96MC5 204 aaPredicted RBP8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 NOL4LQ96MY1 436 aaPredicted RBP8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 ZIM3Q96PE6 472 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 PAIP1Q9H074 479 aaKnown RBP8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 BTNL2Q9UIR0 455 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 LRP12Q9Y561 859 aa8.14□□□□□ -1.11
HDGFL3-204ENST00000563790 A0A096LPI6 279 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 SMIM23A6NLE4 172 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 H0YAE9 185 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 M0R082 166 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 AIM2O14862 343 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 NDUFB8O95169 186 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 CNIH1O95406 144 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 ALDOCP09972 364 aaKnown RBP8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 IL7RP16871 459 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 RPS5P46782 204 aaKnown RBP8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 SLC35B1P78383 322 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 HOXC5Q00444 222 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 GABPB1Q06547 395 aaPredicted RBP8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 MAD2L1Q13257 205 aaPredicted RBP8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 MPPED2Q15777 294 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 MS4A18Q3C1V0 323 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 ANXA8L1Q5VT79 327 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 UEVLDQ8IX04 471 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 OR8G5Q8NG78 346 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 CAPSLQ8WWF8 208 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 TAAR8Q969N4 342 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 SLC25A36Q96CQ1 311 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 SORT1Q99523 831 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 ECSITQ9BQ95 431 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 GHITMQ9H3K2 345 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 HEXA-AS1Q9H8Q6 139 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 PPCSQ9HAB8 311 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 UFSP2Q9NUQ7 469 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 CRCT1Q9UGL9 99 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 APLNQ9ULZ1 77 aa8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 ZNF443Q9Y2A4 671 aaPredicted RBP8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 TBL2Q9Y4P3 447 aaKnown RBP8.13□□□□□ -1.11
HDGFL3-204ENST00000563790 CCDC154A6NI56 674 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 E9PBE3 544 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 TYROBPO43914 113 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 RHBDL1O75783 438 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 TFAP2AP05549 437 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 BPGMP07738 259 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 HTR2AP28223 471 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 TXNL4AP83876 142 aaKnown RBP8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 HPCAP84074 193 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 RPS26P11Q5JNZ5 115 aaPredicted RBP8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 LDLRAD2Q5SZI1 272 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 GPR139Q6DWJ6 353 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 IFT20Q8IY31 132 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 C10orf111Q8N326 155 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 CADM2Q8N3J6 435 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 ZNF781Q8N8C0 355 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 ADPRHL1Q8NDY3 354 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 OR52P1PQ8NH57 321 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 BCAS4Q8TDM0 211 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 TCP10LQ8TDR4 215 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 SLC38A5Q8WUX1 472 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 H1FXQ92522 213 aaKnown RBP8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 DCUN1D4Q92564 292 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 DUS3LQ96G46 650 aaKnown RBP8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 TXNDC15Q96J42 360 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 OVOL2Q9BRP0 275 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 KRTAP4-8Q9BYQ9 185 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms