RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 CHST1O43916 411 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 OR5F1O95221 314 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 T-ENOLP0DO92 83 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 SELLP14151 372 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 PAX6P26367 422 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 AQP6Q13520 282 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 KRT72Q14CN4 511 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 METTL11BQ5VVY1 283 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 C8orf82Q6P1X6 216 aaPredicted RBP8.46□□□□□ -1.06
SF3B3-204ENST00000563739 HACD2Q6Y1H2 254 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 CCDC80Q76M96 950 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 ARPINQ7Z6K5 226 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 CALHM3Q86XJ0 350 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 C10orf67Q8IYJ2 551 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 MICU2Q8IYU8 434 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 C1orf87Q8N0U7 546 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 CELF2-AS1Q8N7Q2 184 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 OR13C2Q8NGS9 318 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 OR10A6Q8NH74 314 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 OR1F12Q8NHA8 337 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 RASD2Q96D21 266 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 Q96M85 177 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 SH3GL1Q99961 368 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 PPA2Q9H2U2 334 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 MMADHCQ9H3L0 296 aaPredicted RBP8.46□□□□□ -1.06
SF3B3-204ENST00000563739 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.46□□□□□ -1.06
SF3B3-204ENST00000563739 SIRT7Q9NRC8 400 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 RIMS3Q9UJD0 308 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 A4GNTQ9UNA3 340 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 A0A1W2PRD5 423 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 A0A1W2PRF3 423 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 A0A1W2PRM7 423 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 WI2-2373I1.2A0A1W2PRP0 233 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 DCTN6O00399 190 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 CDC42EP2O14613 210 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 DVL1O14640 695 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 GYPAP02724 150 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 LIPFP07098 398 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 CD28P10747 220 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 FPR3P25089 353 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 GABRA5P31644 462 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 TGFBR2P37173 567 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 FXYD6P3P58550 94 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 KRTAP10-11P60412 298 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 POU4F2Q12837 409 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 GK2Q14410 553 aaPredicted RBP8.45□□□□□ -1.06
SF3B3-204ENST00000563739 CDONQ4KMG0 1287 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 ZNF826PQ6ZT77 177 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 ASRGL1Q7L266 308 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 WDR86Q86TI4 376 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 NAA40Q86UY6 237 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 GALNT4Q8N4A0 578 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 SCCPDHQ8NBX0 429 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 FAM156AQ8NDB6 213 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 PIFOQ8TCI5 191 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 LRTOMTQ8WZ04 291 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 SEH1LQ96EE3 360 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 ZNF582Q96NG8 517 aaPredicted RBP8.45□□□□□ -1.06
SF3B3-204ENST00000563739 RBP7Q96R05 134 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 WACQ9BTA9 647 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 DPAGT1Q9H3H5 408 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 EFCAB1Q9HAE3 211 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 PNRC2Q9NPJ4 139 aaKnown RBP8.45□□□□□ -1.06
SF3B3-204ENST00000563739 SERTAD4Q9NUC0 356 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 ARL8BQ9NVJ2 186 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 ADA2Q9NZK5 511 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 VSX1Q9NZR4 365 aaPredicted RBP8.45□□□□□ -1.06
SF3B3-204ENST00000563739 KAAG1Q9UBP8 84 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 KPTNQ9Y664 436 aa8.45□□□□□ -1.06
SF3B3-204ENST00000563739 PLECQ15149 4684 aaKnown RBP8.45□□□□□ -1.06
SF3B3-204ENST00000563739 IGHV3OR15-7A0A075B7D8 119 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 OOEPA6NGQ2 149 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 LRRC30A6NM36 301 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 FAM220BPB1ANY3 271 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 H0YHG0 523 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 NPFFO15130 113 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 MPIG6BO95866 241 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 LHBP01229 141 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 FBP1P09467 338 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 ACSM4P0C7M7 580 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 PSKH1P11801 424 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 NR2C1P13056 603 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 SAA4P35542 130 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 KIR2DS4P43632 304 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 OR1E2P47887 323 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 RGS6P49758 472 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 SLC7A2P52569 658 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 HABP2Q14520 560 aaPredicted RBP8.44□□□□□ -1.06
SF3B3-204ENST00000563739 KCNMB1Q16558 191 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 MEP1BQ16820 701 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 VMACQ2NL98 169 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 TEX36Q5VZQ5 186 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 CD276Q5ZPR3 534 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 ERICH5Q6P6B1 374 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 Q6ZTK2 550 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 PTCHD4Q6ZW05 846 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 PATL1Q86TB9 770 aaKnown RBP8.44□□□□□ -1.06
SF3B3-204ENST00000563739 C11orf53Q8IXP5 236 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 FAM216BQ8N7L0 139 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 PNLDC1Q8NA58 520 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms