RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 LRRC42Q9Y546 428 aa16.16■□□□□ 0.18
RAB40C-207ENST00000563109 HTR1AP08908 422 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 DANCRP0C864 163 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 RAC2P15153 192 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 SELEP16581 610 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 MPV17P39210 176 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 GBX2P52951 348 aaPredicted RBP16.15■□□□□ 0.18
RAB40C-207ENST00000563109 GABARAPL2P60520 117 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 PGAP1Q75T13 922 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 PRSS45Q7RTY3 260 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 DTX2Q86UW9 622 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 COMMD2Q86X83 199 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 OR8B12Q8NGG6 310 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 OR52N1Q8NH53 320 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 OR2AE1Q8NHA4 323 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 REEP6Q96HR9 211 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 SIGLEC11Q96RL6 698 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 ZNF649Q9BS31 505 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 YTHDF1Q9BYJ9 559 aaKnown RBP16.15■□□□□ 0.18
RAB40C-207ENST00000563109 CCDC90BQ9GZT6 254 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 DUSP21Q9H596 190 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 DYNLRB1Q9NP97 96 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 PAK1IP1Q9NWT1 392 aaPredicted RBP16.15■□□□□ 0.18
RAB40C-207ENST00000563109 ZNF391Q9UJN7 358 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 HECTD1Q9ULT8 2610 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 ERGIC3Q9Y282 383 aa16.15■□□□□ 0.18
RAB40C-207ENST00000563109 IGLV3-9A0A075B6K5 115 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 TIMM8AO60220 97 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-207ENST00000563109 SRSF10O75494 262 aaKnown RBP16.14■□□□□ 0.17
RAB40C-207ENST00000563109 PNPP00491 289 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 RAF1P04049 648 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 SOD3P08294 240 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 ADRA2AP08913 450 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 C21orf33P30042 268 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-207ENST00000563109 PSMB10P40306 273 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 MVKQ03426 396 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 ZNF92Q03936 586 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 GK2Q14410 553 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-207ENST00000563109 HLXQ14774 488 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-207ENST00000563109 NKPD1Q17RQ9 610 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 MSMPQ1L6U9 139 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 SPRYD4Q8WW59 207 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-207ENST00000563109 RORBQ92753 470 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 CMBLQ96DG6 245 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 PELI1Q96FA3 418 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 LURAP1Q96LR2 239 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 TRAF4Q9BUZ4 470 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-207ENST00000563109 ISG20L2Q9H9L3 353 aaKnown RBP16.14■□□□□ 0.17
RAB40C-207ENST00000563109 TAAR3PQ9P1P4 343 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 ERVK-18Q9QC07 812 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 CLEC2DQ9UHP7 191 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 LRCH1Q9Y2L9 728 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 PLCE1Q9P212 2302 aa16.14■□□□□ 0.17
RAB40C-207ENST00000563109 HRNRQ86YZ3 2850 aaPredicted RBP16.13■□□□□ 0.17
RAB40C-207ENST00000563109 RTTNQ86VV8 2226 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 TMEM129A0AVI4 362 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 GGT3PA6NGU5 568 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 CLPTM1O96005 669 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 IGHV3-13P01766 116 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 OR2G6Q5TZ20 316 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 RNLSQ5VYX0 342 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 LRP11Q86VZ4 500 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 CATSPERDQ86XM0 798 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 NRGNQ92686 78 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 PIGTQ969N2 578 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 SPSB4Q96A44 273 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 HAVCR1Q96D42 359 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 MND1Q9BWT6 205 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 CDCA4Q9BXL8 241 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 CXorf56Q9H5V9 222 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 G6PC2Q9NQR9 355 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 CGGBP1Q9UFW8 167 aaPredicted RBP16.13■□□□□ 0.17
RAB40C-207ENST00000563109 PURGQ9UJV8 347 aaKnown RBP16.13■□□□□ 0.17
RAB40C-207ENST00000563109 PMF1-BGLAPU3KQ54 211 aa16.13■□□□□ 0.17
RAB40C-207ENST00000563109 DSCAMO60469 2012 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 A0A0U1RQV5 110 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 PLSCR5A0PG75 271 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 C5orf63A6NC05 138 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 M0R233 179 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 KITLGP21583 273 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 DNASE1P24855 282 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 PSG7Q13046 419 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 SWI5Q1ZZU3 235 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 ZMAT1Q5H9K5 638 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 C11orf71Q6IPW1 123 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 FDX2Q6P4F2 183 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 PRSS48Q7RTY5 328 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 ELMOD2Q8IZ81 293 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 SGCDQ92629 289 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 SGK3Q96BR1 496 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 LIME1Q9H400 295 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 TRIM36Q9NQ86 728 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 CYSLTR2Q9NS75 346 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 ZNF319Q9P2F9 582 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 MYEF2Q9P2K5 600 aaKnown RBP16.12■□□□□ 0.17
RAB40C-207ENST00000563109 ST6GALNAC2Q9UJ37 374 aa16.12■□□□□ 0.17
RAB40C-207ENST00000563109 CD8AP01732 235 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 TTRP02766 147 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 MT-ND2P03891 347 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 UBCP0CG48 685 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms