RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ADAM8P78325 824 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF615Q8N8J6 731 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 SLC37A2Q8TED4 501 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 NTNG2Q96CW9 530 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF681Q96N22 645 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 YPEL4Q96NS1 127 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 TWSG1Q9GZX9 223 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 CAPN10Q9HC96 672 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 PLA2G2EQ9NZK7 142 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 CENPVL1A0A0U1RR11 272 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 TMEM235A6NFC5 223 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 TXNDC12O95881 172 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 ERCC1P07992 297 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 QDPRP09417 244 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 RPS15AP62244 130 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 GUK1Q16774 197 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 TMEM64Q6YI46 380 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 PRSS35Q8N3Z0 413 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 ADAD2Q8NCV1 583 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 OR10J5Q8NHC4 309 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 RPS4Y2Q8TD47 263 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 LMF1Q96S06 567 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 WDFY3Q8IZQ1 3526 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 ASXL3Q9C0F0 2248 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 A0A1B0GTH9 108 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 A0A1W2PPC1 479 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 ADAP1O75689 374 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 THEGLP0DJG4 465 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 OR8G3PP0DMU2 310 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 IL2RGP31785 369 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 SCAND1P57086 179 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 RAB1AP62820 205 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 NKX6-1P78426 367 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 ARHGAP11AQ6P4F7 1023 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 NPSR1Q6W5P4 371 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 RANBP3LQ86VV4 465 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 OR56A1Q8NGH5 318 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF563Q8TA94 476 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 TMEM106AQ96A25 262 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 RNF166Q96A37 237 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 SLC2A4RGQ9NR83 387 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 STARD10Q9Y365 291 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 H0YGG7 62 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 RPL36A-HNRNPH2H7BZ11 118 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 GPANK1O95872 356 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 ARF3P61204 181 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 GAS6Q14393 721 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 OR1Q1Q15612 314 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 TRMT12Q53H54 448 aaKnown RBP12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 HIST2H3PS2Q5TEC6 136 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 TMEM52Q8NDY8 209 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 OR10AC1Q8NH08 325 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 RSC1A1Q92681 617 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 CCDC74AQ96AQ1 378 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 FAM3DQ96BQ1 224 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 JSRP1Q96MG2 331 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 SPOCK3Q9BQ16 436 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 NMES1Q9C002 83 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 SLC5A7Q9GZV3 580 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 OPN3Q9H1Y3 402 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 MED31Q9Y3C7 131 aa12.56□□□□□ -0.4
GTF3C1-203ENST00000562609 B4DGG1 531 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 PPM1FP49593 454 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 MIDNQ504T8 468 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 DTD1Q8TEA8 209 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 SLC22A18Q96BI1 424 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 PACRGQ96M98 296 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 CDC6Q99741 560 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 PUS1Q9Y606 427 aaKnown RBP eCLIP12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 FAM171A2A8MVW0 826 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 TNFP01375 233 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 CTSEP14091 401 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 TSFMP43897 325 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 DIO1P49895 249 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 EIF5AP63241 154 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 GGTLC2Q14390 218 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 KIR2DS3Q14952 304 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 TOMM34Q15785 309 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 UBE2V2Q15819 145 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 RNASE10Q5GAN6 216 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 AKR1C8PQ5T2L2 129 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 C5orf24Q7Z6I8 188 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 OR51A4Q8NGJ6 313 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 SFXN5Q8TD22 340 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 MRGPRFQ96AM1 343 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 KCNJ16Q9NPI9 418 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 FRRS1LQ9P0K9 344 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 SPAG17Q6Q759 2223 aa12.55□□□□□ -0.4
GTF3C1-203ENST00000562609 ELOA3CA0A087WX78 387 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 NME2P1O60361 137 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 DUS4LO95620 317 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 OR13C7P0DN81 318 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 SLC6A6P31641 620 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 SNCAP37840 140 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 CYCSP99999 105 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 PRR18Q8N4B5 295 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 CDS1Q92903 461 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 MUCL1Q96DR8 90 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 SLC35A4Q96G79 324 aa12.54□□□□□ -0.4
GTF3C1-203ENST00000562609 AQP10Q96PS8 301 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms