RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 MDGA2Q7Z553 956 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 WDR53Q7Z5U6 358 aaPredicted RBP4.87□□□□□ -1.63
CAPN3-211ENST00000562199 TMPRSS11BQ86T26 416 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 C8orf59Q8N0T1 100 aaPredicted RBP4.87□□□□□ -1.63
CAPN3-211ENST00000562199 NPEPL1Q8NDH3 523 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 OR4D9Q8NGE8 314 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 OR51S1Q8NGJ8 323 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 RAB2BQ8WUD1 216 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 SKA2Q8WVK7 121 aaPredicted RBP4.87□□□□□ -1.63
CAPN3-211ENST00000562199 CANT1Q8WVQ1 401 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 ASB15Q8WXK1 588 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 BAALCQ8WXS3 180 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 NPIPB3Q92617 1050 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 KCNJ9Q92806 393 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 TOMM40LQ969M1 308 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 APH1AQ96BI3 265 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 MOAP1Q96BY2 351 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 CMBLQ96DG6 245 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 MSI2Q96DH6 328 aaKnown RBP4.87□□□□□ -1.63
CAPN3-211ENST00000562199 CENPNQ96H22 339 aaPredicted RBP4.87□□□□□ -1.63
CAPN3-211ENST00000562199 HSFY1Q96LI6 401 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 TEPSINQ96N21 525 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 AGAP4Q96P64 663 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 MBOAT4Q96T53 435 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 TBX5Q99593 518 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 SLC6A7Q99884 636 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 ATF6BQ99941 703 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 MRPL57Q9BQC6 102 aaKnown RBP4.87□□□□□ -1.63
CAPN3-211ENST00000562199 MESP1Q9BRJ9 268 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 HCAR1Q9BXC0 346 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 LHPPQ9H008 270 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 ARL6Q9H0F7 186 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 POMKQ9H5K3 350 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 CACYBPQ9HB71 228 aaKnown RBP4.87□□□□□ -1.63
CAPN3-211ENST00000562199 LRTM1Q9HBL6 345 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 ADGRL4Q9HBW9 690 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 MSL2Q9HCI7 577 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 SPHK2Q9NRA0 654 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 FAM49BQ9NUQ9 324 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 CALML5Q9NZT1 146 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 MED11Q9P086 117 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 PSG8Q9UQ74 426 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 C14orf166Q9Y224 244 aaKnown RBP4.87□□□□□ -1.63
CAPN3-211ENST00000562199 SLC17A4Q9Y2C5 497 aa4.87□□□□□ -1.63
CAPN3-211ENST00000562199 TSC2P49815 1807 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 A0A096LPI6 279 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 TGIF2-C20orf24A0A0A6YYL0 155 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 A0A1B0GUS0 222 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 A0A1W2PPV9 198 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 TCRBV5S2A0A599 114 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 SLC22A23A1A5C7 686 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 A8MT66 165 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 BLOC1S5-TXNDC5H3BN57 136 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 H7C417 338 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 J3QRK9 145 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 FXYD1O00168 92 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 EI24O14681 340 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 CASKO14936 926 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 ARPC2O15144 300 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 TIMP1P01033 207 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 IFNA1P01562 189 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 HLA-HP01893 362 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 SFTPBP07988 381 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 DBHP09172 617 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 DUX4L4P0CJ87 422 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 UGT2B7P16662 529 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 RAB3BP20337 219 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 GPX3P22352 226 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 RPS12P25398 132 aaKnown RBP4.86□□□□□ -1.63
CAPN3-211ENST00000562199 NMBRP28336 390 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 HPCAL1P37235 193 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 GPR1P46091 355 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 CDX1P47902 265 aaPredicted RBP4.86□□□□□ -1.63
CAPN3-211ENST00000562199 GLRBP48167 497 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 DNASE1L1P49184 302 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 RAB5CP51148 216 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 RORCP51449 518 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 FUT6P51993 359 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 BIDP55957 195 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 MTCP1P56278 107 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 BACE1P56817 501 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 DLK1P80370 383 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 ZNF155Q12901 538 aaPredicted RBP4.86□□□□□ -1.63
CAPN3-211ENST00000562199 NME3Q13232 169 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 EXOSC2Q13868 293 aaKnown RBP4.86□□□□□ -1.63
CAPN3-211ENST00000562199 SHHQ15465 462 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 ODF4Q2M2E3 257 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 SLC25A52Q3SY17 297 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 CRB2Q5IJ48 1285 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 HENMT1Q5T8I9 393 aaKnown RBP4.86□□□□□ -1.63
CAPN3-211ENST00000562199 SERTAD4-AS1Q5TG53 156 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 HLA-DQA1Q5Y7H0 255 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 TMEM200BQ69YZ2 307 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 C22orf42Q6IC83 251 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 PWWP2BQ6NUJ5 590 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 TEX261Q6UWH6 196 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 DHRS13Q6UX07 377 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 CASP12Q6UXS9 341 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 ZNF841Q6ZN19 808 aa4.86□□□□□ -1.63
CAPN3-211ENST00000562199 ZNF620Q6ZNG0 422 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms