RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 LSAMPQ13449 338 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 ST3GAL2Q16842 350 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 TBC1D28Q2M2D7 210 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 KRTAP27-1Q3LI81 207 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 MZT2AQ6P582 158 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 UNQ6126/PRO20091Q6UXV3 157 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 SSX8Q7RTT4 187 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 NAA40Q86UY6 237 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 MDP1Q86V88 176 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 SERPINA12Q8IW75 414 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 OR8B12Q8NGG6 310 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 OR5D14Q8NGL3 314 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 ASB5Q8WWX0 329 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 RGP1Q92546 391 aaPredicted RBP8.97□□□□□ -0.97
USP3-219ENST00000561326 AKAP1Q92667 903 aaKnown RBP eCLIP8.97□□□□□ -0.97
USP3-219ENST00000561326 APOBEC3DQ96AK3 386 aaPredicted RBP8.97□□□□□ -0.97
USP3-219ENST00000561326 DACH2Q96NX9 599 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 DMRTA2Q96SC8 542 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 KCNS3Q9BQ31 491 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 GPR84Q9NQS5 396 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 ZNF275Q9NSD4 429 aaPredicted RBP8.97□□□□□ -0.97
USP3-219ENST00000561326 COQ3Q9NZJ6 369 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 EIF3KQ9UBQ5 218 aaKnown RBP8.97□□□□□ -0.97
USP3-219ENST00000561326 FOXJ3Q9UPW0 622 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 NBASA2RRP1 2371 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 PRR14LQ5THK1 2151 aa8.96□□□□□ -0.97
USP3-219ENST00000561326 A0A075B6Q4 140 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 LOC100509620A0A075B734 347 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 OR5H1A6NKK0 313 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 CCL1P22362 96 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 GNALP38405 381 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 MAP2K3P46734 347 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 HNRNPA0Q13151 305 aaKnown RBP8.96□□□□□ -0.98
USP3-219ENST00000561326 GFOD2Q3B7J2 385 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 TIMM23BQ5SRD1 257 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 FAM27D1Q5T7N8 215 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 MTFR2Q6P444 385 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 ZNF474Q6S9Z5 364 aaPredicted RBP8.96□□□□□ -0.98
USP3-219ENST00000561326 PCSK4Q6UW60 755 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 STAC2Q6ZMT1 411 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 PGAP1Q75T13 922 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 PRSS45Q7RTY3 260 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 FAM169BQ8N8A8 192 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 SLC30A7Q8NEW0 376 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 OR51A4Q8NGJ6 313 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 OR10AC1Q8NH08 325 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 ACOT12Q8WYK0 555 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 FGGYQ96C11 551 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 C10orf35Q96D05 121 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 LRRC46Q96FV0 321 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 POM121L2Q96KW2 1035 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 CNTNAP3BQ96NU0 1288 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 C1QTNF5Q9BXJ0 243 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 CNTNAP3Q9BZ76 1288 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 SLIRPQ9GZT3 109 aaKnown RBP8.96□□□□□ -0.98
USP3-219ENST00000561326 PPIL3Q9H2H8 161 aaKnown RBP8.96□□□□□ -0.98
USP3-219ENST00000561326 PLEKHA1Q9HB21 404 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 CDH20Q9HBT6 801 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 PEX16Q9Y5Y5 336 aa8.96□□□□□ -0.98
USP3-219ENST00000561326 A0A1B0GTI1 187 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 A0A1B0GUH1 482 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 LOC390937A0A1W2PQ73 354 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 ANXA2P2A6NMY6 339 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 DHRS7CA6NNS2 312 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 NOTOA8MTQ0 251 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 C16orf97H3BN30 126 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 H3BSH0 61 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 J3QW42 95 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 ATXN7O15265 892 aaPredicted RBP8.95□□□□□ -0.98
USP3-219ENST00000561326 PIN1P1O15428 100 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 ERCC1P07992 297 aaPredicted RBP8.95□□□□□ -0.98
USP3-219ENST00000561326 CLEC2LP0C7M8 214 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 PPP3R1P63098 170 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 TSC22D1Q15714 1073 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 COLCA1Q6ZS62 124 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 PARP16Q8N5Y8 322 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 WDR31Q8NA23 367 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 PLPP7Q8NBV4 271 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 SGK3Q96BR1 496 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 KCTD12Q96CX2 325 aaKnown RBP8.95□□□□□ -0.98
USP3-219ENST00000561326 REEP6Q96HR9 211 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 FAM71F1Q96KD3 344 aaPredicted RBP8.95□□□□□ -0.98
USP3-219ENST00000561326 MRI1Q9BV20 369 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 C6orf62Q9GZU0 229 aaPredicted RBP8.95□□□□□ -0.98
USP3-219ENST00000561326 NXF2Q9GZY0 626 aaKnown RBP8.95□□□□□ -0.98
USP3-219ENST00000561326 OR10A4Q9H209 315 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 OPA3Q9H6K4 179 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 NEK6Q9HC98 313 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 TBCCD1Q9NVR7 557 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 ZNF319Q9P2F9 582 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 V9GY05 133 aa8.95□□□□□ -0.98
USP3-219ENST00000561326 ZNF503-AS2A6NEH8 195 aa8.94□□□□□ -0.98
USP3-219ENST00000561326 MAGEB3O15480 346 aa8.94□□□□□ -0.98
USP3-219ENST00000561326 RGS5O15539 181 aa8.94□□□□□ -0.98
USP3-219ENST00000561326 DHRS3O75911 302 aa8.94□□□□□ -0.98
USP3-219ENST00000561326 IGLV3-1P01715 115 aa8.94□□□□□ -0.98
USP3-219ENST00000561326 OCMP0CE72 109 aaPredicted RBP8.94□□□□□ -0.98
USP3-219ENST00000561326 ZNF14P17017 642 aaPredicted RBP8.94□□□□□ -0.98
USP3-219ENST00000561326 FSTP19883 344 aa8.94□□□□□ -0.98
USP3-219ENST00000561326 TUBG1P23258 451 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms