RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 CACUL1Q86Y37 369 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 LYPD6Q86Y78 171 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR4N5Q8IXE1 308 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 SDR16C5Q8N3Y7 309 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 PRSS35Q8N3Z0 413 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 STPG2Q8N412 459 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 KCNRGQ8N5I3 272 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 CSNK1A1LQ8N752 337 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ZNF614Q8N883 585 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 TMEM229BQ8NBD8 167 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ZBTB44Q8NCP5 570 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 C1orf162Q8NEQ5 155 aaPredicted RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR52R1Q8NGF1 315 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR5T3Q8NGG3 340 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR52B4Q8NGK2 314 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR6M1Q8NGM8 313 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR5M8Q8NGP6 311 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR5M1Q8NGP8 315 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR6K6Q8NGW6 343 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR10Z1Q8NGY1 313 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR2G2Q8NGZ5 317 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR10AC1Q8NH08 325 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR4K13Q8NH42 304 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR5AK2Q8NH90 309 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 OTOSQ8NHW6 89 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ZNF519Q8TB69 540 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 PHOSPHO2Q8TCD6 241 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 GPX8Q8TED1 209 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 CCDC107Q8WV48 283 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 PCNPQ8WW12 178 aaKnown RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 TMEM106AQ96A25 262 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 RERGQ96A58 199 aaPredicted RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 PTX4Q96A99 478 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 RASD2Q96D21 266 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ARSGQ96EG1 525 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 MRPS24Q96EL2 167 aaKnown RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 PHYHIPLQ96FC7 376 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 S100A16Q96FQ6 103 aaKnown RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 Q96M85 177 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ZNF285Q96NJ3 590 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 TSPAN32Q96QS1 320 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR8B4Q96RC9 309 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 INTS14Q96SY0 518 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 NMNAT3Q96T66 252 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 LPAR4Q99677 370 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 GINS4Q9BRT9 223 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 PELOQ9BRX2 385 aaKnown RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 C1QTNF6Q9BXI9 259 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 POTEKPQ9BYX7 375 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 CHIAQ9BZP6 476 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 COMMD4Q9H0A8 199 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ARL6Q9H0F7 186 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 LMAN2LQ9H0V9 348 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR10A4Q9H209 315 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 SLC25A32Q9H2D1 315 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 SRMSQ9H3Y6 488 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 WDR76Q9H967 626 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 FKRPQ9H9S5 495 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 BEX1Q9HBH7 125 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 TCF7L1Q9HCS4 588 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 Q9N2J8 555 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 MMP25Q9NPA2 562 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ZDHHC4Q9NPG8 344 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 PRMT8Q9NR22 394 aaPredicted RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 RXFP3Q9NSD7 469 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 RASL12Q9NYN1 266 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 RDH8Q9NYR8 311 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 NKIRAS2Q9NYR9 191 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ZNF224Q9NZL3 707 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 MRPL15Q9P015 296 aaKnown RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 MED11Q9P086 117 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 DUX4Q9UBX2 424 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ZNF69Q9UC07 566 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 MOSPD1Q9UJG1 213 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ANAPC10Q9UM13 185 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 CLEC4AQ9UMR7 237 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 TNFSF18Q9UNG2 199 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ERVK-19Q9WJR5 959 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 DTX4Q9Y2E6 619 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 MRPS7Q9Y2R9 242 aaKnown RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 KCNK7Q9Y2U2 307 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 PRELID3BQ9Y3B1 194 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 RHBDD3Q9Y3P4 386 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 TMEM14AQ9Y6G1 99 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 NOTCH2Q04721 2471 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 CENPFP49454 3210 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 UTRNP46939 3433 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 RALGAPA1Q6GYQ0 2036 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 FXYD6-FXYD2A0A087WZ82 144 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 IGKV3D-11A0A0A0MRZ8 115 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 IGLV1-36A0A0B4J1U3 117 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 A0A0D9SG52 128 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 A0A1B0GVT2 93 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 A0A1W2PQD3 144 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 A0A1W2PQF6 199 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 TMEM72A0PK05 275 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 OR6C74A6NCV1 312 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 POM121BA6NF01 834 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 FRG2CA6NGY1 282 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 LILRA5A6NI73 299 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms