RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 TRBV4-1A0A0J9YWV2 114 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 GNG14A0A1W2PPG7 69 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 GGT3PA6NGU5 568 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 E5RGE8 158 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 ITGB1BP1O14713 200 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 CLDN11O75508 207 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 UPK3AO75631 287 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 B3GAT3O94766 335 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 LRATO95237 230 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 NSA2O95478 260 aaKnown RBP5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 PRNPP04156 253 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF28P17035 718 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 SDC1P18827 310 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 PPIBP23284 216 aaKnown RBP5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 MAS1LP35410 378 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 RAB11AP62491 216 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 HERV-K104P63124 156 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 MRPL49Q13405 166 aaKnown RBP5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 NFATC2Q13469 925 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 TEAD2Q15562 447 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 RAB11BQ15907 218 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 SCGB2B2Q4G0G5 96 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 NKAIN2Q5VXU1 208 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 GLT8D1Q68CQ7 371 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 ADNP2Q6IQ32 1131 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 LPCAT3Q6P1A2 487 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 CD300LGQ6UXG3 332 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 DPY19L4Q7Z388 723 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 SCD5Q86SK9 330 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 IQCF1Q8N6M8 205 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 PNLDC1Q8NA58 520 aaKnown RBP5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 OR52N2Q8NGI0 321 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 OR5M8Q8NGP6 311 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 ISOC2Q96AB3 205 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 RASL10BQ96S79 203 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 OR52A5Q9H2C5 316 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 OR51V1Q9H2C8 321 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 RHOFQ9HBH0 211 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 ABRACLQ9P1F3 81 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 OR14J1Q9UGF5 321 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 NSG2Q9Y328 171 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 SHROOM3Q8TF72 1996 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 TMEM272A0A1B0GTI8 110 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 RNASEK-C17orf49H0YIS7 233 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 MFNGO00587 321 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF749O43361 778 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 OR1F1O43749 312 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 CLDN7O95471 211 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 ADH4P08319 380 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 SLC25A4P12235 298 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 CAV2P51636 162 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 NDUFA6P56556 154 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 SP3Q02447 781 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 HMGN3Q15651 99 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 SLC25A35Q3KQZ1 300 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 NKAIN1Q4KMZ8 207 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 MESTQ5EB52 335 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 DCAF10Q5QP82 559 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 PQLC2Q6ZP29 291 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 BHLHA9Q7RTU4 235 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 PEG10Q86TG7 708 aaKnown RBP5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 OR1J2Q8NGS2 313 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 OR13C3Q8NGS6 347 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 OR2L8Q8NGY9 312 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 OR4L1Q8NH43 312 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 EEF1AKMT1Q8WVE0 214 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 DDA1Q9BW61 102 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 PKIBQ9C010 78 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 SLC25A51Q9H1U9 297 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 FKRPQ9H9S5 495 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 TMEM30AQ9NV96 361 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 DOK5Q9P104 306 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 SNX10Q9Y5X0 201 aa5.98□□□□□ -1.45
TSPAN3-209ENST00000560715 MYO16Q9Y6X6 1858 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 ANKRD20A5PA0PJZ0 165 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF726A6NNF4 738 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 GABARAPH6UMI1 98 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 J3QR06 171 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 NDUFS4O43181 175 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 TIMM8AO60220 97 aaPredicted RBP5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 CPSF4O95639 269 aaKnown RBP5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 CD8AP01732 235 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 CD74P04233 296 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 ATP1B1P05026 303 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 SFTPBP07988 381 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 UCHL1P09936 223 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 METTL15P1P0C7V9 234 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 CEBPBP17676 345 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 PRPS1L1P21108 318 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 LBX1P52954 281 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 RBX1P62877 108 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 C9orf64Q5T6V5 341 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 FAM69BQ5VUD6 431 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 CBLN3Q6UW01 205 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 ACOT7LQ6ZUV0 252 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 FAM24BQ8N5W8 94 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 HORMAD2Q8N7B1 307 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 PIGXQ8TBF5 258 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 TNFAIP8L1Q8WVP5 186 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 SPRYD4Q8WW59 207 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms