RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PRKACGP22612 351 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 GSTT1P30711 240 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 IER3P46695 156 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 DAPP51397 102 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 LOXL3P58215 753 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 GABARAPL2P60520 117 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 ESRRGP62508 458 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 SELENOWP63302 87 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 EGR3Q06889 387 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 DBPQ10586 325 aaPredicted RBP8.21□□□□□ -1.1
TPM1-225ENST00000560679 TOP3AQ13472 1001 aaPredicted RBP8.21□□□□□ -1.1
TPM1-225ENST00000560679 ZNF691Q5VV52 312 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 WDR25Q64LD2 544 aaPredicted RBP8.21□□□□□ -1.1
TPM1-225ENST00000560679 KDM4DQ6B0I6 523 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 REEP3Q6NUK4 255 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 FAHD1Q6P587 224 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 ZNF773Q6PK81 442 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 LYPD2Q6UXB3 125 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 UNQ6126/PRO20091Q6UXV3 157 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 ARMC8Q8IUR7 673 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 SETD9Q8NE22 299 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 OR10AD1Q8NGE0 317 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 OR8B3Q8NGG8 313 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 VANGL1Q8TAA9 524 aaPredicted RBP8.21□□□□□ -1.1
TPM1-225ENST00000560679 TBC1D15Q8TC07 691 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 ADAMTS16Q8TE57 1224 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 PLEKHA8Q96JA3 519 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 MEGF10Q96KG7 1140 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 C4orf45Q96LM5 186 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 OR8B2Q96RD0 313 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 ZNF426Q9BUY5 554 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 ELOVL3Q9HB03 270 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 NANSQ9NR45 359 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 MAN2C1Q9NTJ4 1040 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 ACOXLQ9NUZ1 547 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 KIF17Q9P2E2 1029 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 CEPT1Q9Y6K0 416 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 U3KQV3 271 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 IGHV3-64DA0A0J9YX35 117 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 LOC100130705A0A1B0GUX0 176 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 CCDC160A6NGH7 325 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 CENPBD1B2RD01 187 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 MCIDASD6RGH6 385 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 TNFRSF11BO00300 401 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 P2RY10O00398 339 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 PHYHO14832 338 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 ENSAO43768 121 aaKnown RBP8.2□□□□□ -1.1
TPM1-225ENST00000560679 MITFO75030 526 aaPredicted RBP8.2□□□□□ -1.1
TPM1-225ENST00000560679 F13BP05160 661 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 CD247P20963 164 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 GSTM3P21266 225 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 LAP3P28838 519 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 UGT2B15P54855 530 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 HOXA4Q00056 320 aaPredicted RBP8.2□□□□□ -1.1
TPM1-225ENST00000560679 RPL18Q07020 188 aaKnown RBP8.2□□□□□ -1.1
TPM1-225ENST00000560679 CD47Q08722 323 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 ENDOGQ14249 297 aaKnown RBP8.2□□□□□ -1.1
TPM1-225ENST00000560679 LAPTM4AQ15012 233 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 SGCAQ16586 387 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 ZBED5Q49AG3 693 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 OXLD1Q5BKU9 147 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 C6orf141Q5SZD1 244 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 ARMC4Q5T2S8 1044 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 ZNF613Q6PF04 617 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 SLC25A47Q6Q0C1 308 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 NANOGNBQ7Z5D8 188 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 GPR141Q7Z602 305 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 TSEN54Q7Z6J9 526 aaKnown RBP8.2□□□□□ -1.1
TPM1-225ENST00000560679 ZER1Q7Z7L7 766 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 RANBP3LQ86VV4 465 aaPredicted RBP8.2□□□□□ -1.1
TPM1-225ENST00000560679 CYP4Z1Q86W10 505 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 ALDH16A1Q8IZ83 802 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 OR4C15Q8NGM1 316 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 FBLIM1Q8WUP2 373 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 GATAD2BQ8WXI9 593 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 NSMAFQ92636 917 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 MCHR1Q99705 422 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 KCNN2Q9H2S1 579 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 RIBC2Q9H4K1 309 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 KRT84Q9NSB2 600 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 NDUFAF4Q9P032 175 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 CTSZQ9UBR2 303 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 CLN8Q9UBY8 286 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 BLOC1S6Q9UL45 172 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 ENPP4Q9Y6X5 453 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 HSPE1-MOB4S4R3N1 261 aa8.2□□□□□ -1.1
TPM1-225ENST00000560679 IGHV1-69DA0A0B4J2H0 117 aa8.19□□□□□ -1.1
TPM1-225ENST00000560679 ZNF816-ZNF321PA0A0X1KG74 233 aa8.19□□□□□ -1.1
TPM1-225ENST00000560679 CPSF4LA6NMK7 179 aaKnown RBP8.19□□□□□ -1.1
TPM1-225ENST00000560679 ZNF879B4DU55 563 aa8.19□□□□□ -1.1
TPM1-225ENST00000560679 M0QX08 132 aa8.19□□□□□ -1.1
TPM1-225ENST00000560679 SURF4O15260 269 aa8.19□□□□□ -1.1
TPM1-225ENST00000560679 MLNRO43193 412 aa8.19□□□□□ -1.1
TPM1-225ENST00000560679 FMO6PO60774 539 aa8.19□□□□□ -1.1
TPM1-225ENST00000560679 TSPAN9O75954 239 aa8.19□□□□□ -1.1
TPM1-225ENST00000560679 FSTL3O95633 263 aa8.19□□□□□ -1.1
TPM1-225ENST00000560679 ABHD16AO95870 558 aa8.19□□□□□ -1.1
TPM1-225ENST00000560679 IGHV1-69P01742 117 aa8.19□□□□□ -1.1
TPM1-225ENST00000560679 CST2P09228 141 aa8.19□□□□□ -1.1
TPM1-225ENST00000560679 JUNBP17275 347 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms