RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 ARPC4-TTLL3A0A0A6YYG9 625 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 DPPA5A6NC42 116 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 TMEM212A6NML5 194 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 F5H5K5 113 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 LOC110117498-PIK3R3F6TDL0 507 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 PSMD9O00233 223 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 LYZL6O75951 148 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 HLA-HP01893 362 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 SOD3P08294 240 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 ZNF32P17041 273 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 IGHV1-2P23083 117 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 GABRA5P31644 462 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 APLNRP35414 380 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 OPRL1P41146 370 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 HTR5AP47898 357 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 GDI2P50395 445 aaKnown RBP10.22□□□□□ -0.77
LDLR-212ENST00000560467 CCR9P51686 369 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 TMBIM6P55061 237 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 GP2P55259 537 aaKnown RBP10.22□□□□□ -0.77
LDLR-212ENST00000560467 SLC3A1Q07837 685 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 TBRG1Q3YBR2 411 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 BCL2L15Q5TBC7 163 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 GPR107Q5VW38 600 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 OTPQ5XKR4 325 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 GDPGP1Q6ZNW5 385 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 SSX6Q7RTT6 188 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 ZNF433Q8N7K0 673 aaPredicted RBP10.22□□□□□ -0.77
LDLR-212ENST00000560467 OR5AK2Q8NH90 309 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 ZNF420Q8TAQ5 688 aaPredicted RBP10.22□□□□□ -0.77
LDLR-212ENST00000560467 RAB2BQ8WUD1 216 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 FBXO17Q96EF6 278 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 DCLRE1CQ96SD1 692 aaKnown RBP10.22□□□□□ -0.77
LDLR-212ENST00000560467 REG4Q9BYZ8 158 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 OR2H1Q9GZK4 316 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 ACOXLQ9NUZ1 547 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 EIF3KQ9UBQ5 218 aaKnown RBP10.22□□□□□ -0.77
LDLR-212ENST00000560467 MRM2Q9UI43 246 aaKnown RBP10.22□□□□□ -0.77
LDLR-212ENST00000560467 ATPIF1Q9UII2 106 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 KLHDC2Q9Y2U9 406 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 LRP12Q9Y561 859 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 R4GMQ9 66 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 PRR14LQ5THK1 2151 aa10.22□□□□□ -0.77
LDLR-212ENST00000560467 PNMA8CA0A1B0GUJ8 204 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 AIREO43918 545 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 CD1AP06126 327 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 ANXA2P07355 339 aaKnown RBP10.21□□□□□ -0.77
LDLR-212ENST00000560467 ITGA5P08648 1049 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 COX5BP10606 129 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 COX5AP20674 150 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 MAPK3P27361 379 aaPredicted RBP10.21□□□□□ -0.77
LDLR-212ENST00000560467 CDKN1AP38936 164 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 PSMB10P40306 273 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 MMP16P51512 607 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 HIST1H3AP68431 136 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 PSG4Q00888 419 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 ALKBH1Q13686 389 aaKnown RBP10.21□□□□□ -0.77
LDLR-212ENST00000560467 GABRA6Q16445 453 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 HIKESHIQ53FT3 197 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 PABPC1L2AQ5JQF8 200 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 HIST2H3PS2Q5TEC6 136 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 DRAM2Q6UX65 266 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 CFAP77Q6ZQR2 320 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 HIST2H3AQ71DI3 136 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 COMMD2Q86X83 199 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 OR52H1Q8NGJ2 320 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 LILRB1Q8NHL6 650 aaPredicted RBP10.21□□□□□ -0.77
LDLR-212ENST00000560467 HSD17B8Q92506 261 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 HTRA1Q92743 480 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 GHSRQ92847 366 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 NEUROG1Q92886 237 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 TMIGD2Q96BF3 282 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 SMIM19Q96E16 107 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 PELI1Q96FA3 418 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 PGAM5Q96HS1 289 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 MAP6Q96JE9 813 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 OPALINQ96PE5 141 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 KCNS3Q9BQ31 491 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 BCL7BQ9BQE9 202 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 ZNF649Q9BS31 505 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 FUNDC2Q9BWH2 189 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 OR10A2Q9H208 303 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 EXOSC4Q9NPD3 245 aaKnown RBP10.21□□□□□ -0.77
LDLR-212ENST00000560467 NGBQ9NPG2 151 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 YAE1D1Q9NRH1 226 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 DDX28Q9NUL7 540 aaKnown RBP10.21□□□□□ -0.77
LDLR-212ENST00000560467 NDUFB11Q9NX14 153 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 RSL24D1Q9UHA3 163 aaKnown RBP10.21□□□□□ -0.77
LDLR-212ENST00000560467 N6AMT1Q9Y5N5 214 aa10.21□□□□□ -0.77
LDLR-212ENST00000560467 LOC100506127A0A0U1RQW1 187 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 OR5H1A6NKK0 313 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 ZNF701M0R085 212 aaPredicted RBP10.2□□□□□ -0.78
LDLR-212ENST00000560467 OVOL3O00110 214 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 MAGEB4O15481 346 aaPredicted RBP10.2□□□□□ -0.78
LDLR-212ENST00000560467 OGG1O15527 345 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 PLPP2O43688 288 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 CD2P06729 351 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 UBCP0CG48 685 aaKnown RBP10.2□□□□□ -0.78
LDLR-212ENST00000560467 ZNF12P17014 697 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 PSMB1P20618 241 aaKnown RBP10.2□□□□□ -0.78
LDLR-212ENST00000560467 GALP22466 123 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms